Home LiteratureArticle Details
PMID: 15485916 Published · ppublish English Journal Article

Identification of the proteins required for biosynthesis of diphthamide, the target of bacterial ADP-ribosylating toxins on translation elongation factor 2.

Molecular and cellular biology ·Vol. 24 ·No. 21 ·2004-11-00 ·Pages 9487-97

Liu S, Milne GT, Kuremsky JG, Fink GR, Leppla SH

Abstract

Diphthamide, a posttranslational modification of translation elongation factor 2 that is conserved in all eukaryotes and archaebacteria and is the target of diphtheria toxin, is formed in yeast by the actions of five proteins, Dph1 to -5, and a still unidentified amidating enzyme. Dph2 and Dph5 were previously identified. Here, we report the identification of the remaining three yeast proteins (Dph1, -3, and -4) and show that all five Dph proteins have either functional (Dph1, -2, -3, and -5) or sequence (Dph4) homologs in mammals. We propose a unified nomenclature for these proteins (e.g., HsDph1 to -5 for the human proteins) and their genes based on the yeast nomenclature. We show that Dph1 and Dph2 are homologous in sequence but functionally independent. The human tumor suppressor gene OVCA1, previously identified as homologous to yeast DPH2, is shown to actually be HsDPH1. We show that HsDPH3 is the previously described human diphtheria toxin and Pseudomonas exotoxin A sensitivity required gene 1 and that DPH4 encodes a CSL zinc finger-containing DnaJ-like protein. Other features of these genes are also discussed. The physiological function of diphthamide and the basis of its ubiquity remain a mystery, but evidence is presented that Dph1 to -3 function in vivo as a protein complex in multiple cellular processes.

MeSH Terms
Adenosine Diphosphate/metabolism Amino Acid Sequence Animals CHO Cells Cloning, Molecular Cricetinae Diphtheria Toxin/pharmacology Drug Resistance/drug effects Genes, Fungal/genetics Genetic Complementation Test Histidine/analogs & derivatives,biosynthesis,chemistry,deficiency,metabolism Humans Iron-Sulfur Proteins/genetics,metabolism Mice Minor Histocompatibility Antigens Molecular Sequence Data Molecular Structure Mutation/genetics Peptide Elongation Factor 2/metabolism Phylogeny Protein Binding Proteins/genetics,metabolism Saccharomyces cerevisiae/genetics,metabolism Saccharomyces cerevisiae Proteins/genetics,metabolism Sequence Alignment Tumor Suppressor Proteins/genetics,metabolism
Chemicals
DPH1 protein, human Diphtheria Toxin Dph1 protein, S cerevisiae Iron-Sulfur Proteins Minor Histocompatibility Antigens Peptide Elongation Factor 2 Proteins Saccharomyces cerevisiae Proteins Tumor Suppressor Proteins Histidine Adenosine Diphosphate diphthamide
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Liu Shihui
Microbial Pathogenesis Section, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892, USA.
Milne G Todd
Kuremsky Jeffrey G
Fink Gerald R
Leppla Stephen H
References (31)
31 references, click to expand
  1. Elongator's toxin-target (TOT) function is nuclear localization sequence dependent and suppressed by post-translational modification.
    Mol Microbiol. 2003 Sep;49(5):1297-307 PMID: 12940988
  2. Functional aspects of protein mono-ADP-ribosylation.
    EMBO J. 2003 May 1;22(9):1953-8 PMID: 12727863
  3. Global analysis of protein localization in budding yeast.
    Nature. 2003 Oct 16;425(6959):686-91 PMID: 14562095
  4. Ovca1 regulates cell proliferation, embryonic development, and tumorigenesis.
    Genes Dev. 2004 Feb 1;18(3):320-32 PMID: 14744934
  5. Characterization of the diphtheria toxin-resistance system in Chinese hamster ovary cells.
    Somatic Cell Genet. 1979 Jul;5(4):453-68 PMID: 494060
  6. Posttranslational modification of elongation factor 2 in diphtheria-toxin-resistant mutants of CHO-K1 cells.
    Proc Natl Acad Sci U S A. 1980 Feb;77(2):1010-4 PMID: 6928655
  7. ADP-ribosylation of elongation factor 2 by diphtheria toxin. NMR spectra and proposed structures of ribosyl-diphthamide and its hydrolysis products.
    J Biol Chem. 1980 Nov 25;255(22):10710-6 PMID: 7430147
  8. Biosynthetic labeling of diphthamide in Saccharomyces cerevisiae.
    J Biol Chem. 1983 Apr 25;258(8):4754-8 PMID: 6339504
  9. In vitro biosynthesis of diphthamide, studied with mutant Chinese hamster ovary cells resistant to diphtheria toxin.
    Mol Cell Biol. 1984 Apr;4(4):642-50 PMID: 6717439
  10. Cellular ADP-ribosyltransferase with the same mechanism of action as diphtheria toxin and Pseudomonas toxin A.
    Proc Natl Acad Sci U S A. 1984 May;81(9):2703-7 PMID: 6326138
  11. Diphtheria toxin-resistant mutants of Saccharomyces cerevisiae.
    Mol Cell Biol. 1985 Dec;5(12):3357-60 PMID: 3915773
  12. A Saccharomyces cerevisiae genomic plasmid bank based on a centromere-containing shuttle vector.
    Gene. 1987;60(2-3):237-43 PMID: 3327750
  13. Biosynthesis of diphthamide in Saccharomyces cerevisiae. Partial purification and characterization of a specific S-adenosylmethionine:elongation factor 2 methyltransferase.
    J Biol Chem. 1988 Aug 25;263(24):11692-6 PMID: 3042777
  14. Diphtheria toxin: purification and properties.
    Methods Enzymol. 1988;165:68-76 PMID: 3148099
  15. DPH5, a methyltransferase gene required for diphthamide biosynthesis in Saccharomyces cerevisiae.
    Mol Cell Biol. 1992 Sep;12(9):4026-37 PMID: 1508200
  16. A simple and efficient method for direct gene deletion in Saccharomyces cerevisiae.
    Nucleic Acids Res. 1993 Jul 11;21(14):3329-30 PMID: 8341614
  17. Diphthamide synthesis in Saccharomyces cerevisiae: structure of the DPH2 gene.
    Gene. 1993 Sep 30;132(1):149-54 PMID: 8406038
  18. Elongation factor 2 mutants deficient in diphthamide formation show temperature-sensitive cell growth.
    J Biol Chem. 1994 May 6;269(18):13497-501 PMID: 8175783
  19. Large-scale analysis of gene expression, protein localization, and gene disruption in Saccharomyces cerevisiae.
    Genes Dev. 1994 May 1;8(9):1087-105 PMID: 7926789
  20. Allelic deletion on chromosome 17p13.3 in early ovarian cancer.
    Cancer Res. 1996 Feb 1;56(3):606-11 PMID: 8564979
  21. A cDNA from the ovarian cancer critical region of deletion on chromosome 17p13.3.
    Cancer Lett. 1996 Apr 19;102(1-2):85-90 PMID: 8603384
  22. Identification of two candidate tumor suppressor genes on chromosome 17p13.3.
    Cancer Res. 1996 May 1;56(9):1997-2002 PMID: 8616839
  23. NMR structure of the J-domain and the Gly/Phe-rich region of the Escherichia coli DnaJ chaperone.
    J Mol Biol. 1996 Jul 12;260(2):236-50 PMID: 8764403
  24. Chaperone-mediated protein folding.
    Physiol Rev. 1999 Apr;79(2):425-49 PMID: 10221986
  25. Expression of OVCA1, a candidate tumor suppressor, is reduced in tumors and inhibits growth of ovarian cancer cells.
    Cancer Res. 1999 Oct 1;59(19):4973-83 PMID: 10519411
  26. Cloning and characterization of a new soluble murine J-domain protein that stimulates BiP, Hsc70 and DnaK ATPase activity with different efficiencies.
    Gene. 2001 Aug 8;273(2):267-74 PMID: 11595173
  27. Regulation of nitrogen fixation in the phototrophic purple bacterium Rhodobacter capsulatus.
    J Mol Microbiol Biotechnol. 2002 May;4(3):243-8 PMID: 11931554
  28. KTI11 and KTI13, Saccharomyces cerevisiae genes controlling sensitivity to G1 arrest induced by Kluyveromyces lactis zymocin.
    Mol Microbiol. 2002 May;44(3):865-75 PMID: 11994165
  29. CDD: a curated Entrez database of conserved domain alignments.
    Nucleic Acids Res. 2003 Jan 1;31(1):383-7 PMID: 12520028
  30. Two crystal structures demonstrate large conformational changes in the eukaryotic ribosomal translocase.
    Nat Struct Biol. 2003 May;10(5):379-85 PMID: 12692531
  31. Retroviral insertional mutagenesis identifies a small protein required for synthesis of diphthamide, the target of bacterial ADP-ribosylating toxins.
    Mol Cell. 2003 Sep;12(3):603-13 PMID: 14527407
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
2004-11-00
Pages
9487-97
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC522255
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]