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PMID: 15502225 Published · ppublish English Journal Article

Mutation screening of the TP53 gene by temporal temperature gradient gel electrophoresis.

Methods in molecular biology (Clifton, N.J.) ·Vol. 291 ·2005-00-00 ·Pages 207-16

Sørlie T, Johnsen H, Vu P, Lind GE, Lothe R, Børresen-Dale AL

Abstract

A protocol for detection of mutations in the TP53 gene using temporal temperature gradient gel electrophoresis (TTGE) is described. TTGE is a mutation detection technique that separates DNA fragments differing by single base pairs according to their melting properties in a denaturing gel. It is based on constant denaturing conditions in the gel combined with a temperature gradient during the electrophoretic run. This method combines some of the advantages of the related techniques denaturing gradient gel electrophoresis (DGGE) and constant denaturant gel electrophoresis (CDGE) and eliminates some of the problems. The result is a rapid and sensitive screening technique that is robust and easily set up in smaller laboratory environments.

MeSH Terms
DNA/analysis,chemistry DNA Mutational Analysis/methods Electrophoresis, Polyacrylamide Gel/methods Genes, p53/genetics Humans Mutation/genetics Nucleic Acid Denaturation Temperature
Chemicals
DNA
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Sørlie Therese
Department of Genetics, The Norwegian Radium Hospital, Oslo, Norway.
Johnsen Hilde
Vu Phuong
Lind Guro Elisabeth
Lothe Ragnhild
Børresen-Dale Anne-Lise
Article Info
Journal
Methods in molecular biology (Clifton, N.J.)
Abbr.
Methods Mol Biol
ISSN
1064-3745
Published
2005-00-00
Pages
207-16
Language
English
Region
United States
NLM ID
9214969
Subset
IM
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