Abstract
The roles of variation in DNA content in plant evolution and adaptation remain a major biological enigma. Chromosome number and 2C DNA content were determined for 21 of the 25 species of the genus Sorghum and analysed from a phylogenetic perspective. DNA content was determined by flow cytometry. A Sorghum phylogeny was constructed based on combined nuclear ITS and chloroplast ndhF DNA sequences. Chromosome counts (2n = 10, 20, 30, 40) were, with few exceptions, concordant with published numbers. New chromosome numbers were obtained for S. amplum (2n = 30) and S. leiocladum (2n = 10). 2C DNA content varies 8.1-fold (1.27-10.30 pg) among the 21 Sorghum species. 2C DNA content varies 3.6-fold from 1.27 pg to 4.60 pg among the 2n = 10 species and 5.8-fold (1.52-8.79 pg) among the 2n = 20 species. The x = 5 genome size varies over an 8.8-fold range from 0.26 pg to 2.30 pg. The mean 2C DNA content of perennial species (6.20 pg) is significantly greater than the mean (2.92 pg) of the annuals. Among the 21 species studied, the mean x = 5 genome size of annuals (1.15 pg) and of perennials (1.29 pg) is not significantly different. Statistical analysis of Australian species showed: (a) mean 2C DNA content of annual (2.89 pg) and perennial (7.73 pg) species is significantly different; (b) mean x = 5 genome size of perennials (1.66 pg) is significantly greater than that of the annuals (1.09 pg); (c) the mean maximum latitude at which perennial species grow (-25.4 degrees) is significantly greater than the mean maximum latitude (-17.6) at which annual species grow. The DNA sequence phylogeny splits Sorghum into two lineages, one comprising the 2n = 10 species with large genomes and their polyploid relatives, and the other with the 2n = 20, 40 species with relatively small genomes. An apparent phylogenetic reduction in genome size has occurred in the 2n = 10 lineage. Genome size evolution in the genus Sorghum apparently did not involve a 'one way ticket to genomic obesity' as has been proposed for the grasses.
MeSH Terms
Cell Nucleus/genetics
Chromosomes, Plant
DNA, Plant/analysis,genetics
Evolution, Molecular
Genome, Plant
Karyotyping
Phylogeny
Sorghum/classification,genetics
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Price H James
Department of Soil and Crop Sciences, Texas Agricultural Experiment Station, Texas A&M University, College Station, TX 77843-2474, USA.
[email protected]
Dillon Sally L
Hodnett George
Rooney William L
Ross Larry
Johnston J Spencer
References (20)
20 references, click to expand
-
Comparative genome mapping of Sorghum and maize.
Genetics. 1992 Dec;132(4):1119-30
PMID: 1360933
-
Mechanisms of recent genome size variation in flowering plants.
Ann Bot. 2005 Jan;95(1):127-32
PMID: 15596462
-
A detailed RFLP map of Sorghum bicolor x S. propinquum, suitable for high-density mapping, suggests ancestral duplication of Sorghum chromosomes or chromosomal segments.
Theor Appl Genet. 1994 Mar;87(8):925-33
PMID: 24190526
-
Comparative genetic mapping between duplicated segments on maize chromosomes 3 and 8 and homoeologous regions in sorghum and sugarcane.
Theor Appl Genet. 1996 Jun;92(8):1024-30
PMID: 24166631
-
Chromosomal variation and evolution.
Science. 1966 Jun 10;152(3728):1463-9
PMID: 17788022
-
Comparisons with Caenorhabditis (approximately 100 Mb) and Drosophila (approximately 175 Mb) using flow cytometry show genome size in Arabidopsis to be approximately 157 Mb and thus approximately 25% larger than the Arabidopsis genome initiative estimate of approximately 125 Mb.
Ann Bot. 2003 Apr;91(5):547-57
PMID: 12646499
-
The genomic relationship between cultivated sorghum [Sorghum bicolor (L.) Moench] and Johnsongrass [S. halepense (L.) Pers.]: a re-evaluation.
Theor Appl Genet. 1988 Aug;76(2):277-84
PMID: 24232116
-
A RFLP linkage map of Sorghum bicolor (L.) Moench.
Theor Appl Genet. 1994 Oct;89(2-3):139-45
PMID: 24177820
-
Nuclear DNA content and minimum generation time in herbaceous plants.
Proc R Soc Lond B Biol Sci. 1972 Jun 6;181(1063):109-35
PMID: 4403285
-
Plant genome values: how much do we know?
Proc Natl Acad Sci U S A. 1998 Mar 3;95(5):2011-6
PMID: 9482826
-
Do Plants Have a One-Way Ticket to Genomic Obesity?
Plant Cell. 1997 Sep;9(9):1509-1514
PMID: 12237393
-
A Polyhaploid Obtained from a Hybrid Derivative of Sorghum Halepense x S. Vulgare Var. Sudanense.
Genetics. 1952 Jul;37(4):369-74
PMID: 17247399
-
Distribution and sequence analysis of the centromere-associated repetitive element CEN38 of Sorghum bicolor (Poaceae).
Am J Bot. 2000 Dec;87(12):1757-64
PMID: 11118410
-
Reference standards for determination of DNA content of plant nuclei.
Am J Bot. 1999 May;86(5):609-13
PMID: 10330063
-
Feast and famine in plant genomes.
Genetica. 2002 May;115(1):37-47
PMID: 12188047
-
CLUSTAL V: improved software for multiple sequence alignment.
Comput Appl Biosci. 1992 Apr;8(2):189-91
PMID: 1591615
-
Rapid flow cytometric analysis of the cell cycle in intact plant tissues.
Science. 1983 Jun 3;220(4601):1049-51
PMID: 17754551
-
Construction of an RFLP map in sorghum and comparative mapping in maize.
Genome. 1994 Apr;37(2):236-43
PMID: 18470074
-
Evolution of genome size in the angiosperms.
Am J Bot. 2003 Nov;90(11):1596-603
PMID: 21653334
-
Structure and evolution of the genomes ofsorghum bicolor andZea mays.
Theor Appl Genet. 1993 Jun;86(5):598-604
PMID: 24193709