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PMID: 15637271 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.

Science (New York, N.Y.) ·Vol. 307 ·No. 5706 ·2005-01-07 ·Pages 82-6

Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK, James K, Rutherford K, Harris B, Harris D, Churcher C, Quail MA, Ormond D, Doggett J, Trueman HE, Mendoza J, Bidwell SL, Rajandream MA, Carucci DJ, Yates JR, Kafatos FC, Janse CJ, Barrell B, Turner CM, Waters AP, Sinden RE

Abstract

Plasmodium berghei and Plasmodium chabaudi are widely used model malaria species. Comparison of their genomes, integrated with proteomic and microarray data, with the genomes of Plasmodium falciparum and Plasmodium yoelii revealed a conserved core of 4500 Plasmodium genes in the central regions of the 14 chromosomes and highlighted genes evolving rapidly because of stage-specific selective pressures. Four strategies for gene expression are apparent during the parasites' life cycle: (i) housekeeping; (ii) host-related; (iii) strategy-specific related to invasion, asexual replication, and sexual development; and (iv) stage-specific. We observed posttranscriptional gene silencing through translational repression of messenger RNA during sexual development, and a 47-base 3' untranslated region motif is implicated in this process.

MeSH Terms
3' Untranslated Regions Animals Anopheles/parasitology Computational Biology Evolution, Molecular Gene Expression Profiling Gene Silencing Genes, Protozoan Genome, Protozoan Life Cycle Stages Malaria/parasitology Oligonucleotide Array Sequence Analysis Plasmodium/genetics,growth & development,metabolism Plasmodium berghei/genetics,growth & development,metabolism Plasmodium chabaudi/genetics,growth & development,metabolism Plasmodium falciparum/genetics,growth & development,metabolism Plasmodium yoelii/genetics,growth & development,metabolism Proteome/analysis Proteomics Protozoan Proteins/analysis RNA, Messenger/genetics,metabolism RNA, Protozoan/genetics,metabolism Selection, Genetic Transcription, Genetic
Chemicals
3' Untranslated Regions Proteome Protozoan Proteins RNA, Messenger RNA, Protozoan
Authors & Affiliations
30 authors, click to expand affiliations / ORCID
Hall Neil
Pathogen Sequencing Unit, Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge CB10 1SA, UK. [email protected]
Karras Marianna
Raine J Dale
Carlton Jane M
Kooij Taco W A
Berriman Matthew
Florens Laurence
Janssen Christoph S
Pain Arnab
Christophides Georges K
James Keith
Rutherford Kim
Harris Barbara
Harris David
Churcher Carol
Quail Michael A
Ormond Doug
Doggett Jon
Trueman Holly E
Mendoza Jacqui
Bidwell Shelby L
Rajandream Marie-Adele
Carucci Daniel J
Yates John R
Kafatos Fotis C
Janse Chris J
Barrell Bart
Turner C Michael R
Waters Andrew P
Sinden Robert E
Article Info
Journal
Science (New York, N.Y.)
Abbr.
Science
ISSN
1095-9203
Published
2005-01-07
Pages
82-6
Language
English
Region
United States
NLM ID
0404511
Subset
IM
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