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PMID: 15643957 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Genetic variability in natural populations of Arabidopsis thaliana in northern Europe.

Molecular ecology ·Vol. 14 ·No. 1 ·2005-01-00 ·Pages 137-48

Stenøien HK, Fenster CB, Tonteri A, Savolainen O

Abstract

Ten populations of the model plant Arabidopsis thaliana were collected along a north-south gradient in Norway and screened for microsatellite polymorphisms in 25 loci and variability in quantitative traits. Overall, the average levels of genetic diversity were found to be relatively high in these populations, compared to previously published surveys of within population variability. Six of the populations were polymorphic at microsatellite loci, resulting in an overall proportion of polymorphic loci of 18%, and a relatively high gene diversity for a selfing species (HE = 0.06). Of the overall variability, 12% was found within populations. Two of six polymorphic populations contained heterozygous individuals. Both FST and phylogenetic analyses showed no correlation between geographical and genetic distances. Haplotypic diversity patterns suggested postglacial colonization of Scandinavia from a number of different sources. Heritable variation was observed for many of the studied quantitative traits, with all populations showing variability in at least some traits, even populations with no microsatellite variability. There was a positive association between variability in quantitative traits and microsatellites within populations. Several quantitative traits exhibited QST values significantly less than FST, suggesting that selection may be acting to retard differentiation for these traits.

MeSH Terms
Arabidopsis/classification,genetics Base Sequence DNA Primers Environment Gene Frequency Genetic Carrier Screening Genetic Variation Geography Microsatellite Repeats Norway Phylogeny Polymorphism, Genetic
Chemicals
DNA Primers
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Stenøien Hans K
Uppsala University, Department of Ecology and Evolution, Evolutionary Biology Centre, SE-752 36 Uppsala, Sweden. [email protected]
Fenster Charles B
Tonteri Anni
Savolainen Outi
Article Info
Journal
Molecular ecology
Abbr.
Mol Ecol
ISSN
0962-1083
Published
2005-01-00
Pages
137-48
Language
English
Region
England
NLM ID
9214478
Subset
IM
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