Home LiteratureArticle Details
PMID: 15895077 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Caenorhabditis elegans RME-6 is a novel regulator of RAB-5 at the clathrin-coated pit.

Nature cell biology ·Vol. 7 ·No. 6 ·2005-06-00 ·Pages 559-69

Sato M, Sato K, Fonarev P, Huang CJ, Liou W, Grant BD

Abstract

Here we identify a new regulator of endocytosis called RME-6. RME-6 is evolutionarily conserved among metazoans and contains Ras-GAP (GTPase-activating protein)-like and Vps9 domains. Consistent with the known catalytic function of Vps9 domains in Rab5 GDP/GTP exchange, we found that RME-6 binds specifically to Caenorhabditis elegans RAB-5 in the GDP-bound conformation, and rme-6 mutants have phenotypes that indicate low RAB-5 activity. However, unlike other Rab5-associated proteins, a rescuing green fluorescent protein (GFP)-RME-6 fusion protein primarily localizes to clathrin-coated pits, physically interacts with alpha-adaptin, a clathrin adaptor protein, and requires clathrin to achieve its cortical localization. In rme-6 mutants, transport from the plasma membrane to endosomes is defective, and small 110-nm endocytic vesicles accumulate just below the plasma membrane. These results suggest a mechanism for the activation of Rab5 in clathrin-coated pits or clathrin-coated vesicles that is essential for the delivery of endocytic cargo to early endosomes.

MeSH Terms
Adaptor Protein Complex alpha Subunits/metabolism Animals Caenorhabditis elegans/genetics,metabolism,ultrastructure Caenorhabditis elegans Proteins/genetics,isolation & purification,metabolism Cell Membrane/metabolism,ultrastructure Clathrin-Coated Vesicles/metabolism,ultrastructure Endocytosis/physiology Endosomes/metabolism Membrane Proteins/genetics,isolation & purification,metabolism Microscopy, Electron, Transmission Molecular Sequence Data Mutation Phenotype Protein Binding/physiology Protein Transport/physiology Recombinant Fusion Proteins/genetics,metabolism Transport Vesicles/metabolism rab5 GTP-Binding Proteins/genetics,metabolism
Chemicals
Adaptor Protein Complex alpha Subunits Caenorhabditis elegans Proteins Membrane Proteins RME-6 protein, C elegans Recombinant Fusion Proteins rab5 GTP-Binding Proteins
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Sato Miyuki
Department of Molecular Biology and Biochemistry, Rutgers University, Piscataway, NJ 08854, USA.
Sato Ken
Fonarev Paul
Huang Chih-Jen
Liou Willisa
Grant Barth D
References (45)
45 references, click to expand
  1. Oligomeric complexes link Rab5 effectors with NSF and drive membrane fusion via interactions between EEA1 and syntaxin 13.
    Cell. 1999 Aug 6;98(3):377-86 PMID: 10458612
  2. Vps9p is a guanine nucleotide exchange factor involved in vesicle-mediated vacuolar protein transport.
    J Biol Chem. 1999 May 21;274(21):15284-91 PMID: 10329739
  3. Rab5 regulates motility of early endosomes on microtubules.
    Nat Cell Biol. 1999 Oct;1(6):376-82 PMID: 10559966
  4. Phosphatidylinositol-3-OH kinases are Rab5 effectors.
    Nat Cell Biol. 1999 Aug;1(4):249-52 PMID: 10559924
  5. Receptor-mediated endocytosis in the Caenorhabditis elegans oocyte.
    Mol Biol Cell. 1999 Dec;10(12):4311-26 PMID: 10588660
  6. Selective membrane recruitment of EEA1 suggests a role in directional transport of clathrin-coated vesicles to early endosomes.
    J Biol Chem. 2000 Feb 11;275(6):3745-8 PMID: 10660521
  7. Epidermal growth factor and membrane trafficking. EGF receptor activation of endocytosis requires Rab5a.
    J Cell Biol. 2000 Oct 30;151(3):539-50 PMID: 11062256
  8. Caenorhabditis elegans auxilin: a J-domain protein essential for clathrin-mediated endocytosis in vivo.
    Nat Cell Biol. 2001 Feb;3(2):215-9 PMID: 11175756
  9. Ingestion of bacterially expressed dsRNAs can produce specific and potent genetic interference in Caenorhabditis elegans.
    Gene. 2001 Jan 24;263(1-2):103-12 PMID: 11223248
  10. Creation of low-copy integrated transgenic lines in Caenorhabditis elegans.
    Genetics. 2001 Mar;157(3):1217-26 PMID: 11238406
  11. Rab proteins as membrane organizers.
    Nat Rev Mol Cell Biol. 2001 Feb;2(2):107-17 PMID: 11252952
  12. Regulation of endocytosis by CUP-5, the Caenorhabditis elegans mucolipin-1 homolog.
    Nat Genet. 2001 May;28(1):64-8 PMID: 11326278
  13. Evidence that RME-1, a conserved C. elegans EH-domain protein, functions in endocytic recycling.
    Nat Cell Biol. 2001 Jun;3(6):573-9 PMID: 11389442
  14. RME-8, a conserved J-domain protein, is required for endocytosis in Caenorhabditis elegans.
    Mol Biol Cell. 2001 Jul;12(7):2011-21 PMID: 11451999
  15. Genetic analysis of endocytosis in Caenorhabditis elegans: coelomocyte uptake defective mutants.
    Genetics. 2001 Sep;159(1):133-45 PMID: 11560892
  16. Biological basket weaving: formation and function of clathrin-coated vesicles.
    Annu Rev Cell Dev Biol. 2001;17:517-68 PMID: 11687498
  17. Ras-activated endocytosis is mediated by the Rab5 guanine nucleotide exchange activity of RIN1.
    Dev Cell. 2001 Jul;1(1):73-82 PMID: 11703925
  18. Divalent Rab effectors regulate the sub-compartmental organization and sorting of early endosomes.
    Nat Cell Biol. 2002 Feb;4(2):124-33 PMID: 11788822
  19. Gamma-adaptin interacts directly with Rabaptin-5 through its ear domain.
    J Biochem. 2002 Mar;131(3):327-36 PMID: 11872161
  20. Deciphering endocytosis in Caenorhabditis elegans.
    Traffic. 2002 Jan;3(1):11-9 PMID: 11872138
  21. A monomeric red fluorescent protein.
    Proc Natl Acad Sci U S A. 2002 Jun 11;99(12):7877-82 PMID: 12060735
  22. Endocytosis-mediated downregulation of LIN-12/Notch upon Ras activation in Caenorhabditis elegans.
    Nature. 2002 Dec 12;420(6916):686-90 PMID: 12478297
  23. Divalent interaction of the GGAs with the Rabaptin-5-Rabex-5 complex.
    EMBO J. 2003 Jan 2;22(1):78-88 PMID: 12505986
  24. GAPs galore! A survey of putative Ras superfamily GTPase activating proteins in man and Drosophila.
    Biochim Biophys Acta. 2003 Mar 17;1603(2):47-82 PMID: 12618308
  25. Genome-wide RNAi screening in Caenorhabditis elegans.
    Methods. 2003 Aug;30(4):313-21 PMID: 12828945
  26. Coordinate activation of maternal protein degradation during the egg-to-embryo transition in C. elegans.
    Dev Cell. 2003 Sep;5(3):451-62 PMID: 12967564
  27. Visualization of Rab5 activity in living cells by FRET microscopy and influence of plasma-membrane-targeted Rab5 on clathrin-dependent endocytosis.
    J Cell Sci. 2003 Dec 1;116(Pt 23):4799-810 PMID: 14600265
  28. Disease-related myotubularins function in endocytic traffic in Caenorhabditis elegans.
    Mol Biol Cell. 2004 Jan;15(1):189-96 PMID: 14565969
  29. Alsin is a Rab5 and Rac1 guanine nucleotide exchange factor.
    J Biol Chem. 2004 Jun 4;279(23):24612-23 PMID: 15033976
  30. Structure, exchange determinants, and family-wide rab specificity of the tandem helical bundle and Vps9 domains of Rabex-5.
    Cell. 2004 Sep 3;118(5):607-17 PMID: 15339665
  31. Dual engagement regulation of protein interactions with the AP-2 adaptor alpha appendage.
    J Biol Chem. 2004 Oct 29;279(44):46191-203 PMID: 15292237
  32. The genetics of Caenorhabditis elegans.
    Genetics. 1974 May;77(1):71-94 PMID: 4366476
  33. Localization of low molecular weight GTP binding proteins to exocytic and endocytic compartments.
    Cell. 1990 Jul 27;62(2):317-29 PMID: 2115402
  34. let-60, a gene that specifies cell fates during C. elegans vulval induction, encodes a ras protein.
    Cell. 1990 Nov 30;63(5):921-31 PMID: 2257629
  35. Efficient gene transfer in C.elegans: extrachromosomal maintenance and integration of transforming sequences.
    EMBO J. 1991 Dec;10(12):3959-70 PMID: 1935914
  36. A genetic mapping system in Caenorhabditis elegans based on polymorphic sequence-tagged sites.
    Genetics. 1992 Jul;131(3):609-24 PMID: 1321065
  37. The small GTPase rab5 functions as a regulatory factor in the early endocytic pathway.
    Cell. 1992 Sep 4;70(5):715-28 PMID: 1516130
  38. A GDP/GTP exchange-stimulatory activity for the Rab5-RabGDI complex on clathrin-coated vesicles from bovine brain.
    J Biol Chem. 1995 May 12;270(19):11257-62 PMID: 7744760
  39. Rabaptin-5 is a direct effector of the small GTPase Rab5 in endocytic membrane fusion.
    Cell. 1995 Nov 3;83(3):423-32 PMID: 8521472
  40. IQGAP1, a calmodulin-binding protein with a rasGAP-related domain, is a potential effector for cdc42Hs.
    EMBO J. 1996 Jun 17;15(12):2997-3005 PMID: 8670801
  41. A novel Rab5 GDP/GTP exchange factor complexed to Rabaptin-5 links nucleotide exchange to effector recruitment and function.
    Cell. 1997 Sep 19;90(6):1149-59 PMID: 9323142
  42. Inhibition of Caenorhabditis elegans vulval induction by gap-1 and by let-23 receptor tyrosine kinase.
    Genes Dev. 1997 Oct 15;11(20):2715-28 PMID: 9334333
  43. A novel role for Rab5-GDI in ligand sequestration into clathrin-coated pits.
    Curr Biol. 1998 Jan 1;8(1):34-45 PMID: 9427626
  44. Characterization of the C. elegans gap-2 gene encoding a novel Ras-GTPase activating protein and its possible role in larval development.
    Genes Cells. 1998 Mar;3(3):189-202 PMID: 9619631
  45. The Rab5 effector EEA1 is a core component of endosome docking.
    Nature. 1999 Feb 18;397(6720):621-5 PMID: 10050856
Article Info
Journal
Nature cell biology
Abbr.
Nat Cell Biol
ISSN
1465-7392
Published
2005-06-00
Epub
2005-00-15
Pages
559-69
Language
English
Region
England
NLM ID
100890575
PMCID
PMC1398054
Subset
IM
Grants
NIGMS NIH HHS · R01 GM067237 · United States
NIGMS NIH HHS · GM67237 · United States
Databases
GENBANK
AY750054
Corrections
CommentIn
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]