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PMID: 15922591 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S. Review

Structural divergence and distant relationships in proteins: evolution of the globins.

Current opinion in structural biology ·Vol. 15 ·No. 3 ·2005-06-00 ·Pages 290-301

Lecomte JT, Vuletich DA, Lesk AM

Abstract

The globin family has long been known from studies of approximately 150-residue proteins such as vertebrate myoglobins and haemoglobins. Recently, this family has been enriched by the investigation of the sequences and structures of truncated globins, which have the same basic topology but are approximately 30 residues shorter and exhibit functions other than the familiar one of binding diatomic ligands. The divergence of protein sequences, structures and functions reveals Nature's exploration of the potential inherent in a folding pattern, that is, the topology of the native structure. The observation of what remains constant and what varies during the evolution of a protein family reveals essential features of structure and function. Study of proteins with a wide range of divergence can therefore sharpen our understanding of how different amino acid sequences can determine similar three-dimensional structures. Globins have provided, and continue to provide, interesting material for such studies.

MeSH Terms
Amino Acid Sequence Binding Sites Conserved Sequence/genetics Evolution, Molecular Genetic Variation/genetics Globins/analysis,chemistry,genetics Models, Chemical Models, Genetic Models, Molecular Molecular Sequence Data Phylogeny Protein Binding Protein Conformation Protein Folding Sequence Alignment/methods Sequence Analysis, Protein/methods Sequence Homology, Amino Acid
Chemicals
Globins
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Lecomte Juliette T J
Department of Chemistry, The Huck Institutes of the Life Sciences: Genomics, Proteomics and Bioinformatics Institute, The Pennsylvania State University, University Park, PA 16802, USA.
Vuletich David A
Lesk Arthur M
Article Info
Journal
Current opinion in structural biology
Abbr.
Curr Opin Struct Biol
ISSN
0959-440X
Published
2005-06-00
Pages
290-301
Language
English
Region
England
NLM ID
9107784
Subset
IM
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