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PMID: 15972006 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Deriving an ontology for human gene expression sources from the CYTOMER database on human organs and cell types.

In silico biology ·Vol. 5 ·No. 1 ·2005-00-00 ·Pages 61-6

Michael H, Chen X, Fricke E, Haubrock M, Ricanek R, Wingender E

Abstract

CYTOMER is a relational database of organs/tissues, cell types, physiological systems and developmental stages that currently focuses on the human system. From this database, we have derived an ontology for anatomical and morphological structures for the human organism which includes all embryonal stages and the cell types constituting these structures. The ontology has been transferred to the OWL format and is freely available for download at http://cytomer/bioinf.med.uni-goettingen.de.

MeSH Terms
Animals Computational Biology/methods Database Management Systems Databases, Factual Databases, Genetic Databases, Protein Gene Expression Regulation Gene Expression Regulation, Developmental Humans Internet Software Systems Biology Time Factors
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Michael Holger
Department of Bioinformatics, Faculty of Medicine, Georg August University Goettingen, Goldschmidtstr. 1, D-37077 Goettingen, Germany. [email protected]
Chen Xin
Fricke Ellen
Haubrock Martin
Ricanek Remko
Wingender Edgar
Article Info
Journal
In silico biology
Abbr.
In Silico Biol
ISSN
1386-6338
Published
2005-00-00
Pages
61-6
Language
English
Region
Netherlands
NLM ID
9815902
Subset
IM
External Links
PubMed source
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