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PMID: 16199521 Published · ppublish English Comparative Study Journal Article

A unique gene expression signature discriminates familial Alzheimer's disease mutation carriers from their wild-type siblings.

Nagasaka Y, Dillner K, Ebise H, Teramoto R, Nakagawa H, Lilius L, Axelman K, Forsell C, Ito A, Winblad B, Kimura T, Graff C

Abstract

Alzheimer's disease (AD) is a neurodegenerative disease with an insidious onset and progressive course that inevitably leads to death. The current diagnostic tools do not allow for diagnosis until the disease has lead to irreversible brain damage. Genetic studies of autosomal dominant early onset familial AD has identified three causative genes: amyloid precursor protein (APP), presenilin 1 and 2 (PSEN1 and PSEN2). We performed a global gene expression analysis on fibroblasts from 33 individuals (both healthy and demented mutation carriers as well as wild-type siblings) from three families segregating the APP(SWE), APP(ARC) and PSEN1 H163Y mutations, respectively. The mutations cause hereditary progressive cognitive disorder, including typical autosomal dominant AD. Our data show that the mutation carriers share a common gene expression profile significantly different from that of their wild-type siblings. The results indicate that the disease process starts several decades before the onset of cognitive decline, suggesting that presymptomatic diagnosis of AD and other progressive cognitive disorders may be feasible in the near future.

MeSH Terms
Alzheimer Disease/genetics Amyloid beta-Protein Precursor/genetics,metabolism Cluster Analysis Fibroblasts/metabolism Gene Expression Profiling Genes, Dominant/genetics Genetic Testing/methods Humans Image Processing, Computer-Assisted Membrane Proteins/genetics,metabolism Microarray Analysis Mutation/genetics Presenilin-1 Principal Component Analysis
Chemicals
Amyloid beta-Protein Precursor Membrane Proteins PSEN1 protein, human Presenilin-1
Authors & Affiliations
12 authors, click to expand affiliations / ORCID
Nagasaka Yosuke
Research Division, Sumitomo Pharmaceuticals Co., Ltd., 3-1-98 Kasugade-naka, Konohana, Osaka 554-0022, Japan.
Dillner Karin
Ebise Hayao
Teramoto Reiji
Nakagawa Hiroyuki
Lilius Lena
Axelman Karin
Forsell Charlotte
Ito Akira
Winblad Bengt
Kimura Toru
Graff Caroline
References (34)
34 references, click to expand
  1. Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling.
    Nature. 2000 Feb 3;403(6769):503-11 PMID: 10676951
  2. Microarray analysis in Alzheimer's disease and normal aging.
    IUBMB Life. 2004 Jun;56(6):349-54 PMID: 15370883
  3. Molecular classification of cutaneous malignant melanoma by gene expression profiling.
    Nature. 2000 Aug 3;406(6795):536-40 PMID: 10952317
  4. Molecular portraits of human breast tumours.
    Nature. 2000 Aug 17;406(6797):747-52 PMID: 10963602
  5. Up-regulation of calcineurin Abeta mRNA in the Alzheimer's disease brain: assessment by cDNA microarray.
    Biochem Biophys Res Commun. 2001 Jun 8;284(2):310-6 PMID: 11394878
  6. The 'Arctic' APP mutation (E693G) causes Alzheimer's disease by enhanced Abeta protofibril formation.
    Nat Neurosci. 2001 Sep;4(9):887-93 PMID: 11528419
  7. Use of cDNA microarray in the search for molecular markers involved in the onset of Alzheimer's disease dementia.
    J Neurosci Res. 2001 Sep 15;65(6):471-6 PMID: 11550214
  8. Gene expression profiling of amyloid beta peptide-stimulated human post-mortem brain microglia.
    Neurobiol Aging. 2001 Nov-Dec;22(6):957-66 PMID: 11755004
  9. A gene expression profile of Alzheimer's disease.
    DNA Cell Biol. 2001 Nov;20(11):683-95 PMID: 11788046
  10. Gene expression profiling predicts clinical outcome of breast cancer.
    Nature. 2002 Jan 31;415(6871):530-6 PMID: 11823860
  11. Molecular characterisation of soft tissue tumours: a gene expression study.
    Lancet. 2002 Apr 13;359(9314):1301-7 PMID: 11965276
  12. Molecular profiling of non-small cell lung cancer and correlation with disease-free survival.
    Cancer Res. 2002 Jun 1;62(11):3005-8 PMID: 12036904
  13. Deciphering the genetic basis of Alzheimer's disease.
    Annu Rev Genomics Hum Genet. 2002;3:67-99 PMID: 12142353
  14. Amyloid precursor protein, presenilins, and alpha-synuclein: molecular pathogenesis and pharmacological applications in Alzheimer's disease.
    Pharmacol Rev. 2002 Sep;54(3):469-525 PMID: 12223532
  15. Gene expression profiling of 12633 genes in Alzheimer hippocampal CA1: transcription and neurotrophic factor down-regulation and up-regulation of apoptotic and pro-inflammatory signaling.
    J Neurosci Res. 2002 Nov 1;70(3):462-73 PMID: 12391607
  16. The metabolic basis of the Refsum syndrome.
    Birth Defects Orig Artic Ser. 1971 Feb;7(1):42-52 PMID: 4141910
  17. Increased de novo purine synthesis in cultured skin fibroblasts from heterozygotes for the Lesch-Nyhan syndrome. A sensitive marker for carrier detection.
    Hum Hered. 1979;29(1):64-8 PMID: 761926
  18. Clinical diagnosis of Alzheimer's disease: report of the NINCDS-ADRDA Work Group under the auspices of Department of Health and Human Services Task Force on Alzheimer's Disease.
    Neurology. 1984 Jul;34(7):939-44 PMID: 6610841
  19. A pathogenic mutation for probable Alzheimer's disease in the APP gene at the N-terminus of beta-amyloid.
    Nat Genet. 1992 Aug;1(5):345-7 PMID: 1302033
  20. Gene dose of apolipoprotein E type 4 allele and the risk of Alzheimer's disease in late onset families.
    Science. 1993 Aug 13;261(5123):921-3 PMID: 8346443
  21. Association of apolipoprotein E allele epsilon 4 with late-onset familial and sporadic Alzheimer's disease.
    Neurology. 1993 Aug;43(8):1467-72 PMID: 8350998
  22. A large Swedish family with Alzheimer's disease with a codon 670/671 amyloid precursor protein mutation. A clinical and genealogical investigation.
    Arch Neurol. 1994 Dec;51(12):1193-7 PMID: 7986173
  23. The presenilin genes: a new gene family involved in Alzheimer disease pathology.
    Hum Mol Genet. 1996;5 Spec No:1449-55 PMID: 8875251
  24. Microtubule-associated protein tau in human fibroblasts with the Swedish Alzheimer mutation.
    Neurosci Lett. 1996 Dec 6;220(1):9-12 PMID: 8977136
  25. Wide range of disease onset in a family with Alzheimer disease and a His163Tyr mutation in the presenilin-1 gene.
    Arch Neurol. 1998 May;55(5):698-702 PMID: 9605727
  26. The relationships between age, sex, and the incidence of dementia and Alzheimer disease: a meta-analysis.
    Arch Gen Psychiatry. 1998 Sep;55(9):809-15 PMID: 9736007
  27. The incidence of dementia: a meta-analysis.
    Neurology. 1998 Sep;51(3):728-33 PMID: 9748017
  28. Molecular classification of cancer: class discovery and class prediction by gene expression monitoring.
    Science. 1999 Oct 15;286(5439):531-7 PMID: 10521349
  29. Gene expression profiles of cholinergic nucleus basalis neurons in Alzheimer's disease.
    Neurochem Res. 2002 Oct;27(10):1035-48 PMID: 12462403
  30. A molecular signature of metastasis in primary solid tumors.
    Nat Genet. 2003 Jan;33(1):49-54 PMID: 12469122
  31. Molecular classification of synovial sarcomas, leiomyosarcomas and malignant fibrous histiocytomas by gene expression profiling.
    Br J Cancer. 2003 Feb 24;88(4):510-5 PMID: 12592363
  32. Predicting hepatitis B virus-positive metastatic hepatocellular carcinomas using gene expression profiling and supervised machine learning.
    Nat Med. 2003 Apr;9(4):416-23 PMID: 12640447
  33. Data mining of gene expression changes in Alzheimer brain.
    Artif Intell Med. 2004 Jun;31(2):137-54 PMID: 15219291
  34. Expression profile of transcripts in Alzheimer's disease tangle-bearing CA1 neurons.
    Ann Neurol. 2000 Jul;48(1):77-87 PMID: 10894219
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
2005-10-11
Epub
2005-00-30
Pages
14854-9
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC1253556
Subset
IM
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