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PMID: 16381883 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S.

The integrated microbial genomes (IMG) system.

Nucleic acids research ·Vol. 34 ·No. Database issue ·2006-01-01 ·Pages D344-8

Markowitz VM, Korzeniewski F, Palaniappan K, Szeto E, Werner G, Padki A, Zhao X, Dubchak I, Hugenholtz P, Anderson I, Lykidis A, Mavromatis K, Ivanova N, Kyrpides NC

Abstract

The integrated microbial genomes (IMG) system is a new data management and analysis platform for microbial genomes provided by the Joint Genome Institute (JGI). IMG contains both draft and complete JGI genomes integrated with other publicly available microbial genomes of all three domains of life. IMG provides tools and viewers for analyzing genomes, genes and functions, individually or in a comparative context. IMG allows users to focus their analysis on subsets of genes and genomes of interest and to save the results of their analysis. IMG is available at http://img.jgi.doe.gov.

MeSH Terms

Bacteriophages/genetics Database Management Systems Databases, Genetic Genome, Archaeal Genome, Bacterial Genomics Internet Phylogeny Systems Integration User-Computer Interface

Authors & Affiliations

14 authors, click to expand affiliations / ORCID

Markowitz Victor M

Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA, USA.

Korzeniewski Frank

Palaniappan Krishna

Szeto Ernest

Werner Greg

Padki Anu

Zhao Xueling

Dubchak Inna

Hugenholtz Philip

Anderson Iain

Lykidis Athanasios

Mavromatis Konstantinos

Ivanova Natalia

Kyrpides Nikos C

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12 references, click to expand

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Article Info

Journal

Nucleic acids research

Abbr.

Nucleic Acids Res

ISSN

1362-4962

DOI

10.1093/nar/gkj024

Published

2006-01-01

Pages

D344-8

Language

English

Region

England

NLM ID

0411011

PMCID

PMC1347387

Subset

External Links

PubMed source DOI: 10.1093/nar/gkj024 PMC Full Text View journal details

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