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PMID: 16381955 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

DrugBank: a comprehensive resource for in silico drug discovery and exploration.

Nucleic acids research ·Vol. 34 ·No. Database issue ·2006-01-01 ·Pages D668-72

Wishart DS, Knox C, Guo AC, Shrivastava S, Hassanali M, Stothard P, Chang Z, Woolsey J

Abstract

DrugBank is a unique bioinformatics/cheminformatics resource that combines detailed drug (i.e. chemical) data with comprehensive drug target (i.e. protein) information. The database contains >4100 drug entries including >800 FDA approved small molecule and biotech drugs as well as >3200 experimental drugs. Additionally, >14,000 protein or drug target sequences are linked to these drug entries. Each DrugCard entry contains >80 data fields with half of the information being devoted to drug/chemical data and the other half devoted to drug target or protein data. Many data fields are hyperlinked to other databases (KEGG, PubChem, ChEBI, PDB, Swiss-Prot and GenBank) and a variety of structure viewing applets. The database is fully searchable supporting extensive text, sequence, chemical structure and relational query searches. Potential applications of DrugBank include in silico drug target discovery, drug design, drug docking or screening, drug metabolism prediction, drug interaction prediction and general pharmaceutical education. DrugBank is available at http://redpoll.pharmacy.ualberta.ca/drugbank/.

MeSH Terms
Computational Biology Databases, Factual/standards Drug Delivery Systems Drug Design Internet Pharmaceutical Preparations/chemistry Pharmacology Proteins/antagonists & inhibitors,chemistry Quality Control User-Computer Interface
Chemicals
Pharmaceutical Preparations Proteins
Authors & Affiliations
8 authors, click to expand affiliations / ORCID
Wishart David S
Department of Computing Science, University of Alberta, Edmonton, AB, Canada T6G 2E8. [email protected]
Knox Craig
Guo An Chi
Shrivastava Savita
Hassanali Murtaza
Stothard Paul
Chang Zhan
Woolsey Jennifer
References (9)
9 references, click to expand
  1. Quality of consumer drug information provided by four Web sites.
    Am J Health Syst Pharm. 1999 Nov 15;56(22):2308-11 PMID: 10582822
  2. PharmGKB: the Pharmacogenetics Knowledge Base.
    Nucleic Acids Res. 2002 Jan 1;30(1):163-5 PMID: 11752281
  3. TTD: Therapeutic Target Database.
    Nucleic Acids Res. 2002 Jan 1;30(1):412-5 PMID: 11752352
  4. The KEGG resource for deciphering the genome.
    Nucleic Acids Res. 2004 Jan 1;32(Database issue):D277-80 PMID: 14681412
  5. The CyberCell Database (CCDB): a comprehensive, self-updating, relational database to coordinate and facilitate in silico modeling of Escherichia coli.
    Nucleic Acids Res. 2004 Jan 1;32(Database issue):D293-5 PMID: 14681416
  6. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
    Nucleic Acids Res. 1997 Sep 1;25(17):3389-402 PMID: 9254694
  7. GeneCards: a novel functional genomics compendium with automated data mining and query reformulation support.
    Bioinformatics. 1998;14(8):656-64 PMID: 9789091
  8. The Universal Protein Resource (UniProt).
    Nucleic Acids Res. 2005 Jan 1;33(Database issue):D154-9 PMID: 15608167
  9. The European Bioinformatics Institute's data resources: towards systems biology.
    Nucleic Acids Res. 2005 Jan 1;33(Database issue):D46-53 PMID: 15608238
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
1362-4962
Published
2006-01-01
Pages
D668-72
Language
English
Region
England
NLM ID
0411011
PMCID
PMC1347430
Subset
IM
Analysis Services
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