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PMID: 16382140 Published · ppublish English Journal Article Research Support, N.I.H., Extramural

Altered RNA editing in mice lacking ADAR2 autoregulation.

Molecular and cellular biology ·Vol. 26 ·No. 2 ·2006-01-00 ·Pages 480-8

Feng Y, Sansam CL, Singh M, Emeson RB

Abstract

ADAR2 is a double-stranded-RNA-specific adenosine deaminase involved in the editing of mammalian RNAs by the site-selective conversion of adenosine to inosine. Previous studies from our laboratory have demonstrated that ADAR2 can modify its own pre-mRNA to create a proximal 3' splice site containing a noncanonical adenosine-inosine dinucleotide. Alternative splicing to this proximal acceptor adds 47 nucleotides to the mature ADAR2 transcript, thereby resulting in the loss of functional ADAR2 protein expression due to premature translation termination in an alternate reading frame. To examine whether the editing of ADAR2 transcripts represents a negative autoregulatory strategy to modulate ADAR2 protein expression, we have generated genetically modified mice in which the ability of ADAR2 to edit its own pre-mRNA has been selectively ablated by deletion of a critical sequence (editing site complementary sequence [ECS]) required for adenosine-to-inosine conversion. Here we demonstrate that ADAR2 autoediting and subsequent alternative splicing are abolished in homozygous deltaECS mice and that ADAR2 protein expression is increased in numerous tissues compared to wild-type animals. The observed increases in ADAR2 protein expression correlate with the extent of ADAR2 autoediting observed with wild-type tissues and correspond to increases in the editing of ADAR2 substrates, indicating that ADAR2 autoediting is a key regulator of ADAR2 protein expression and activity in vivo.

MeSH Terms
Adenosine Deaminase/biosynthesis,genetics Alternative Splicing/physiology Animals Gene Expression Male Mice Mice, Mutant Strains Mutation RNA Editing RNA, Messenger/biosynthesis RNA-Binding Proteins
Chemicals
RNA, Messenger RNA-Binding Proteins ADARB1 protein, human Adenosine Deaminase
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Feng Yi
Department of Pharmacology, Vanderbilt University School of Medicine, 465 21st Avenue South, 8160 Medical Research Building 3, Nashville, Tennessee 37232-8548, USA.
Sansam Christopher L
Singh Minati
Emeson Ronald B
References (63)
63 references, click to expand
  1. RNA editing of the human serotonin 5-HT2C receptor. alterations in suicide and implications for serotonergic pharmacotherapy.
    Neuropsychopharmacology. 2001 May;24(5):478-91 PMID: 11282248
  2. Phylogenetic comparison of the pre-mRNA adenosine deaminase ADAR2 genes and transcripts: conservation and diversity in editing site sequence and alternative splicing patterns.
    Gene. 2002 Oct 16;299(1-2):83-94 PMID: 12459255
  3. RNA editing of the 5-HT(2C) receptor is reduced in schizophrenia.
    Mol Psychiatry. 2001 Jul;6(4):373-9 PMID: 11443520
  4. Modulation of serotonin 2C receptor editing by sustained changes in serotonergic neurotransmission.
    J Neurosci. 2002 Dec 15;22(24):10529-32 PMID: 12486144
  5. New and old roles of the double-stranded RNA-binding domain.
    J Struct Biol. 2002 Oct-Dec;140(1-3):147-53 PMID: 12490163
  6. Dynamic association of RNA-editing enzymes with the nucleolus.
    J Cell Sci. 2003 May 1;116(Pt 9):1805-18 PMID: 12665561
  7. Frequency domain analysis of noise in autoregulated gene circuits.
    Proc Natl Acad Sci U S A. 2003 Apr 15;100(8):4551-6 PMID: 12671069
  8. Widespread inosine-containing mRNA in lymphocytes regulated by ADAR1 in response to inflammation.
    Immunology. 2003 May;109(1):15-23 PMID: 12709013
  9. Regulation of ion channel/neurotransmitter receptor function by RNA editing.
    Curr Opin Neurobiol. 2003 Jun;13(3):279-83 PMID: 12850211
  10. RNA editing of serotonin 2C receptor in human postmortem brains of major mental disorders.
    Neurosci Lett. 2003 Aug 7;346(3):169-72 PMID: 12853111
  11. Nervous system targets of RNA editing identified by comparative genomics.
    Science. 2003 Aug 8;301(5634):832-6 PMID: 12907802
  12. Recognition of double-stranded RNA by proteins and small molecules.
    Biopolymers. 2003 Sep;70(1):86-102 PMID: 12925995
  13. Modulation of RNA editing by functional nucleolar sequestration of ADAR2.
    Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14018-23 PMID: 14612560
  14. Summing up the noise in gene networks.
    Nature. 2004 Jan 29;427(6973):415-8 PMID: 14749823
  15. Stress-induced apoptosis associated with null mutation of ADAR1 RNA editing deaminase gene.
    J Biol Chem. 2004 Feb 6;279(6):4952-61 PMID: 14613934
  16. Liver disintegration in the mouse embryo caused by deficiency in the RNA-editing enzyme ADAR1.
    J Biol Chem. 2004 Feb 6;279(6):4894-902 PMID: 14615479
  17. Structure and sequence determinants required for the RNA editing of ADAR2 substrates.
    J Biol Chem. 2004 Feb 6;279(6):4941-51 PMID: 14660658
  18. Adenosine deaminases acting on RNA (ADARs): RNA-editing enzymes.
    Genome Biol. 2004;5(2):209 PMID: 14759252
  19. Glutamate receptors: RNA editing and death of motor neurons.
    Nature. 2004 Feb 26;427(6977):801 PMID: 14985749
  20. Altered RNA editing of serotonin 5-HT2C receptor induced by interferon: implications for depression associated with cytokine therapy.
    Brain Res Mol Brain Res. 2004 Apr 29;124(1):70-8 PMID: 15093687
  21. Proteins binding to duplexed RNA: one motif, multiple functions.
    Trends Biochem Sci. 2000 May;25(5):241-6 PMID: 10782096
  22. A third member of the RNA-specific adenosine deaminase gene family, ADAR3, contains both single- and double-stranded RNA binding domains.
    RNA. 2000 May;6(5):755-67 PMID: 10836796
  23. Engineering stability in gene networks by autoregulation.
    Nature. 2000 Jun 1;405(6786):590-3 PMID: 10850721
  24. Point mutation in an AMPA receptor gene rescues lethality in mice deficient in the RNA-editing enzyme ADAR2.
    Nature. 2000 Jul 6;406(6791):78-81 PMID: 10894545
  25. Requirement of the RNA editing deaminase ADAR1 gene for embryonic erythropoiesis.
    Science. 2000 Dec 1;290(5497):1765-8 PMID: 11099415
  26. The role of RNA editing of kainate receptors in synaptic plasticity and seizures.
    Neuron. 2001 Jan;29(1):217-27 PMID: 11182093
  27. VISTA: computational tools for comparative genomics.
    Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W273-9 PMID: 15215394
  28. Systematic identification of abundant A-to-I editing sites in the human transcriptome.
    Nat Biotechnol. 2004 Aug;22(8):1001-5 PMID: 15258596
  29. Widespread RNA editing of embedded alu elements in the human transcriptome.
    Genome Res. 2004 Sep;14(9):1719-25 PMID: 15342557
  30. Control of human potassium channel inactivation by editing of a small mRNA hairpin.
    Nat Struct Mol Biol. 2004 Oct;11(10):950-6 PMID: 15361858
  31. Comprehensive observational assessment: Ia. A systematic, quantitative procedure for assessing the behavioral and physiologic state of the mouse.
    Psychopharmacologia. 1968 Sep 20;13(3):222-57 PMID: 5679627
  32. Alternative production of calcitonin and CGRP mRNA is regulated at the calcitonin-specific splice acceptor.
    Nature. 1989 Sep 7;341(6237):76-80 PMID: 2788825
  33. Double-stranded RNA unwinding and modifying activity is detected ubiquitously in primary tissues and cell lines.
    Mol Cell Biol. 1990 Oct;10(10):5586-90 PMID: 2398905
  34. Infertility in male transgenic mice: disruption of sperm development by HSV-tk expression in postmeiotic germ cells.
    Biol Reprod. 1990 Oct;43(4):684-93 PMID: 1963095
  35. Determinants of Ca2+ permeability in both TM1 and TM2 of high affinity kainate receptor channels: diversity by RNA editing.
    Neuron. 1993 Mar;10(3):491-500 PMID: 7681676
  36. Purification of the Xenopus laevis double-stranded RNA adenosine deaminase.
    J Biol Chem. 1994 Apr 1;269(13):9933-9 PMID: 8144588
  37. Molecular cloning of cDNA for double-stranded RNA adenosine deaminase, a candidate enzyme for nuclear RNA editing.
    Proc Natl Acad Sci U S A. 1994 Nov 22;91(24):11457-61 PMID: 7972084
  38. Control of kinetic properties of AMPA receptor channels by nuclear RNA editing.
    Science. 1994 Dec 9;266(5191):1709-13 PMID: 7992055
  39. Different transmission rates of herpesvirus thymidine kinase reporter transgenes from founder male parents and male parents of subsequent generations.
    Mol Reprod Dev. 1995 Aug;41(4):425-34 PMID: 7576610
  40. A mammalian RNA editing enzyme.
    Nature. 1996 Feb 1;379(6564):460-4 PMID: 8559253
  41. Efficient in vivo manipulation of mouse genomic sequences at the zygote stage.
    Proc Natl Acad Sci U S A. 1996 Jun 11;93(12):5860-5 PMID: 8650183
  42. Early-onset epilepsy and postnatal lethality associated with an editing-deficient GluR-B allele in mice.
    Science. 1995 Dec 8;270(5242):1677-80 PMID: 7502080
  43. Two forms of human double-stranded RNA-specific editase 1 (hRED1) generated by the insertion of an Alu cassette.
    RNA. 1997 May;3(5):453-63 PMID: 9149227
  44. Regulation of serotonin-2C receptor G-protein coupling by RNA editing.
    Nature. 1997 May 15;387(6630):303-8 PMID: 9153397
  45. A standardized nomenclature for adenosine deaminases that act on RNA.
    RNA. 1997 Sep;3(9):947-9 PMID: 9292492
  46. Molecular basis of double-stranded RNA-protein interactions: structure of a dsRNA-binding domain complexed with dsRNA.
    EMBO J. 1998 Dec 15;17(24):7505-13 PMID: 9857205
  47. RNA editing of the human serotonin 5-hydroxytryptamine 2C receptor silences constitutive activity.
    J Biol Chem. 1999 Apr 2;274(14):9472-8 PMID: 10092629
  48. Regulation of alternative splicing by RNA editing.
    Nature. 1999 May 6;399(6731):75-80 PMID: 10331393
  49. The importance of internal loops within RNA substrates of ADAR1.
    J Mol Biol. 1999 Aug 6;291(1):1-13 PMID: 10438602
  50. A survey of RNA editing in human brain.
    Genome Res. 2004 Dec;14(12):2379-87 PMID: 15545495
  51. Widespread A-to-I RNA editing of Alu-containing mRNAs in the human transcriptome.
    PLoS Biol. 2004 Dec;2(12):e391 PMID: 15534692
  52. ADAR1 RNA deaminase limits short interfering RNA efficacy in mammalian cells.
    J Biol Chem. 2005 Feb 4;280(5):3946-53 PMID: 15556947
  53. Deficient RNA editing of GluR2 and neuronal death in amyotropic lateral sclerosis.
    J Mol Med (Berl). 2005 Feb;83(2):110-20 PMID: 15624111
  54. A bioinformatic screen for novel A-I RNA editing sites reveals recoding editing in BC10.
    Bioinformatics. 2005 Jun 1;21(11):2590-5 PMID: 15797904
  55. Stochasticity in gene expression: from theories to phenotypes.
    Nat Rev Genet. 2005 Jun;6(6):451-64 PMID: 15883588
  56. Direct removal in the mouse of a floxed neo gene from a three-loxP conditional knockout allele by two novel approaches.
    Genesis. 2001 May;30(1):1-6 PMID: 11353511
  57. RNA-editing of the 5-HT(2C) receptor alters agonist-receptor-effector coupling specificity.
    Br J Pharmacol. 2001 Sep;134(2):386-92 PMID: 11564657
  58. Control of kinetic properties of GluR2 flop AMPA-type channels: impact of R/G nuclear editing.
    Eur J Neurosci. 2002 Jan;15(1):51-62 PMID: 11860506
  59. Altered editing of serotonin 2C receptor pre-mRNA in the prefrontal cortex of depressed suicide victims.
    Neuron. 2002 Apr 25;34(3):349-56 PMID: 11988167
  60. RNA editing by adenosine deaminases that act on RNA.
    Annu Rev Biochem. 2002;71:817-46 PMID: 12045112
  61. RNA hairpins in noncoding regions of human brain and Caenorhabditis elegans mRNA are edited by adenosine deaminases that act on RNA.
    Proc Natl Acad Sci U S A. 2002 Jun 11;99(12):7906-11 PMID: 12048240
  62. RNA editing by adenosine deaminases generates RNA and protein diversity.
    Biochimie. 2002 Aug;84(8):791-803 PMID: 12457566
  63. Tuning of RNA editing by ADAR is required in Drosophila.
    EMBO J. 2005 Jun 15;24(12):2183-93 PMID: 15920480
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
2006-01-00
Pages
480-8
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC1346902
Subset
IM
Grants
NINDS NIH HHS · R01 NS033323 · United States
NINDS NIH HHS · NS33323 · United States
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