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PMID: 16414958 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

The outer membrane protein OmpW forms an eight-stranded beta-barrel with a hydrophobic channel.

The Journal of biological chemistry ·Vol. 281 ·No. 11 ·2006-03-17 ·Pages 7568-77

Hong H, Patel DR, Tamm LK, van den Berg B

Abstract

Escherichia coli OmpW belongs to a family of small outer membrane proteins that are widespread in Gram-negative bacteria. Their functions are unknown, but recent data suggest that they may be involved in the protection of bacteria against various forms of environmental stress. To gain insight into the function of these proteins A we have determined the crystal structure of E. coli OmpW to 2.7-A resolution. The structure shows that OmpW forms an 8-stranded beta-barrel with a long and narrow hydrophobic channel that contains a bound n-dodecyl-N,N-dimethylamine-N-oxide detergent molecule. Single channel conductance experiments show that OmpW functions as an ion channel in planar lipid bilayers. The channel activity can be blocked by the addition of n-dodecyl-N,N-dimethylamine-N-oxide. Taken together, the data suggest that members of the OmpW family could be involved in the transport of small hydrophobic molecules across the bacterial outer membrane.

MeSH Terms
Amino Acid Sequence Arabinose/chemistry Bacterial Outer Membrane Proteins/chemistry,physiology Centrifugation, Density Gradient Crystallography, X-Ray Escherichia coli/enzymology,metabolism Escherichia coli Proteins/chemistry,physiology Ligands Lipid Bilayers/chemistry Membrane Proteins/chemistry Models, Molecular Molecular Conformation Molecular Sequence Data Mutagenesis, Site-Directed Protein Conformation Protein Structure, Secondary Sequence Homology, Amino Acid Sucrose/chemistry,pharmacology
Chemicals
Bacterial Outer Membrane Proteins Escherichia coli Proteins Ligands Lipid Bilayers Membrane Proteins ompW protein, E coli Sucrose Arabinose
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Hong Heedeok
Department of Molecular Physiology and Biological Physics, University of Virginia, Charlottesville, VA 22908, USA.
Patel Dimki R
Tamm Lukas K
van den Berg Bert
Article Info
Journal
The Journal of biological chemistry
Abbr.
J Biol Chem
ISSN
0021-9258
Published
2006-03-17
Epub
2006-00-12
Pages
7568-77
Language
English
Region
United States
NLM ID
2985121R
Subset
IM
Grants
NIGMS NIH HHS · R01 GM051329 · United States
NIGMS NIH HHS · GM 051329 · United States
NIGMS NIH HHS · GM 074824 · United States
Databases
PDB
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