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PMID: 16507136 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Loss of LIN-35, the Caenorhabditis elegans ortholog of the tumor suppressor p105Rb, results in enhanced RNA interference.

Genome biology ·Vol. 7 ·No. 1 ·2006-00-00 ·Pages R4

Lehner B, Calixto A, Crombie C, Tischler J, Fortunato A, Chalfie M, Fraser AG

Abstract

Genome-wide RNA interference (RNAi) screening is a very powerful tool for analyzing gene function in vivo in Caenorhabditis elegans. The effectiveness of RNAi varies from gene to gene, however, and neuronally expressed genes are largely refractive to RNAi in wild-type worms. We found that C. elegans strains carrying mutations in lin-35, the worm ortholog of the tumor suppressor gene p105Rb, or a subset of the genetically related synMuv B family of chromatin-modifying genes, show increased strength and penetrance for many germline, embryonic, and post-embryonic RNAi phenotypes, including neuronal RNAi phenotypes. Mutations in these same genes also enhance somatic transgene silencing via an RNAi-dependent mechanism. Two genes, mes-4 and zfp-1, are required both for the vulval lineage defects resulting from mutations in synMuv B genes and for RNAi, suggesting a common mechanism for the function of synMuv B genes in vulval development and in regulating RNAi. Enhanced RNAi in the germline of lin-35 worms suggests that misexpression of germline genes in somatic cells cannot alone account for the enhanced RNAi observed in this strain. A worm strain with a null mutation in lin-35 is more sensitive to RNAi than any other previously described single mutant strain, and so will prove very useful for future genome-wide RNAi screens, particularly for identifying genes with neuronal functions. As lin-35 is the worm ortholog of the mammalian tumor suppressor gene p105Rb, misregulation of RNAi may be important during human oncogenesis.

MeSH Terms
Animals Caenorhabditis elegans/anatomy & histology,genetics,metabolism Caenorhabditis elegans Proteins/chemistry,genetics,metabolism Cell Lineage Gene Silencing Genes, Helminth Models, Genetic Mutation/genetics Nervous System/metabolism Phenotype RNA Interference Repressor Proteins/chemistry,genetics,metabolism Retinoblastoma Protein/chemistry Suppression, Genetic
Chemicals
Caenorhabditis elegans Proteins Repressor Proteins Retinoblastoma Protein lin-35 protein, C elegans
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Lehner Ben
The Wellcome Trust Sanger Institute, Hinxton, Cambridge CB10 1SA, UK.
Calixto Andrea
Crombie Catriona
Tischler Julia
Fortunato Angelo
Chalfie Martin
Fraser Andrew G
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Article Info
Journal
Genome biology
Abbr.
Genome Biol
ISSN
1474-760X
Published
2006-00-00
Epub
2006-00-20
Pages
R4
Language
English
Region
England
NLM ID
100960660
PMCID
PMC1431716
Subset
IM
Grants
NIGMS NIH HHS · R37 GM030997 · United States
PHS HHS · GC30997 · United States
Wellcome Trust · United Kingdom
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