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PMID: 16513174 Published · ppublish English Comparative Study Journal Article Research Support, Non-U.S. Gov't Review

Structural studies on 2-oxoglutarate oxygenases and related double-stranded beta-helix fold proteins.

Journal of inorganic biochemistry ·Vol. 100 ·No. 4 ·2006-04-00 ·Pages 644-69

Clifton IJ, McDonough MA, Ehrismann D, Kershaw NJ, Granatino N, Schofield CJ

Abstract

Mononuclear non-heme ferrous iron dependent oxygenases and oxidases constitute an extended enzyme family that catalyze a wide range of oxidation reactions. The largest known sub-group employs 2-oxoglutarate as a cosubstrate and catalysis by these and closely related enzymes is proposed to proceed via a ferryl intermediate coordinated to the active site via a conserved HXD/E...H motif. Crystallographic studies on the 2-oxoglutarate oxygenases and related enzymes have revealed a common double-stranded beta-helix core fold that supports the residues coordinating the iron. This fold is common to proteins of the cupin and the JmjC transcription factor families. The crystallographic studies on 2-oxoglutarate oxygenases and closely related enzymes are reviewed and compared with other metallo-enzymes/related proteins containing a double-stranded beta-helix fold. Proposals regarding the suitability of the active sites and folds of the 2-oxoglutarate oxygenases to catalyze reactions involving reactive oxidizing species are described.

MeSH Terms
Binding Sites Catalysis Crystallography, X-Ray Iron/chemistry,metabolism Ketoglutaric Acids/chemistry,metabolism Models, Biological Models, Molecular Oxidation-Reduction Oxygenases/chemistry,metabolism Protein Conformation Structure-Activity Relationship Substrate Specificity
Chemicals
Ketoglutaric Acids ferryl iron Iron Oxygenases
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Clifton Ian J
The Oxford Centre for Molecular Sciences and the Department of Chemistry, Chemistry Research Laboratory, University of Oxford, Mansfield Road, Oxford, Oxon OX1 3TA, UK.
McDonough Michael A
Ehrismann Dominic
Kershaw Nadia J
Granatino Nicolas
Schofield Christopher J
Article Info
Journal
Journal of inorganic biochemistry
Abbr.
J Inorg Biochem
ISSN
0162-0134
Published
2006-04-00
Epub
2006-00-02
Pages
644-69
Language
English
Region
United States
NLM ID
7905788
Subset
IM
Grants
Biotechnology and Biological Sciences Research Council · B18672 · United Kingdom
Biotechnology and Biological Sciences Research Council · BBS/B/07683 · United Kingdom
Wellcome Trust · United Kingdom
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