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PMID: 16617474 Published · ppublish English Journal Article

Binding of 16S rRNA to chloroplast 30S ribosomal proteins blotted on nitrocellulose.

Nucleic acids research ·Vol. 12 ·No. 19 ·1984-10-11 ·Pages 7293-304

Rozier C, Mache R

Abstract

Protein-RNA associations were studied by a method using proteins blotted on a nitrocellulose sheet. This method was assayed with Escherichia Coli 30S ribosomal components. In stringent conditions (300 mM NaCl or 20 degrees C) only 9 E. coli ribosomal proteins strongly bound to the 16S rRNA: S4, S5, S7, S9, S12, S13, S14, S19, S20. 8 of these proteins have been previously found to bind independently to the 16S rRNA. The same method was applied to determine protein-RNA interactions in spinach chloroplast 30S ribosomal subunits. A set of only 7 proteins was bound to chloroplast rRNA in stringent conditions: chloroplast S6, S10, S11, S14, S15, S17 and S22. They also bound to E. coli 16S rRNA. This set includes 4 chloroplast-synthesized proteins: S6, S11, S15 and S22. The core particles obtained after treatment by LiCl of chloroplast 30S ribosomal subunit contained 3 proteins (S6, S10 and S14) which are included in the set of 7 binding proteins. This set of proteins probably play a part in the early steps of the assembly of the chloroplast 30S ribosomal subunit.

Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Rozier C
Laboratoire de Physiologie Cellulaire Végétale, CNRS-UA 571,. Université de Grenoble I, 38402 St Martin d'Hères Cedex, France.
Mache R
References (19)
19 references, click to expand
  1. Ribosomal proteins. Protein compositions of biosynthetic precursors and artifical subparticles from ribosomal subunits in Escherichia coli K 12.
    Eur J Biochem. 1971 May 28;20(2):249-57 PMID: 4934681
  2. Components of bacterial ribosomes.
    Annu Rev Biochem. 1982;51:155-83 PMID: 6180678
  3. A general secondary-structure model for procaryotic and eucaryotic RNAs from the small ribosomal subunits.
    Eur J Biochem. 1981 Dec;120(3):487-95 PMID: 6174326
  4. Structure and function of E. coli ribosomes. V. Reconstitution of functionally active 30S ribosomal particles from RNA and proteins.
    Proc Natl Acad Sci U S A. 1968 Mar;59(3):777-84 PMID: 4868216
  5. Influence of the ionic environment on the in vitro transcription of the spinach plastid DNA by a selectively bound RNA-polymerase DNA complex.
    Biochim Biophys Acta. 1981 Oct 27;655(3):374-82 PMID: 7284393
  6. Purification, primary structure, and homology relationships of a chloroplast ribosomal protein.
    Proc Natl Acad Sci U S A. 1982 Nov;79(22):6871-5 PMID: 16593249
  7. A method of preparing Escherichia coli 16 S RNA possessing previously unobserved 30 S ribosomal protein binding sites.
    J Mol Biol. 1976 Feb 25;101(2):155-70 PMID: 772215
  8. Number and molecular weights of the basic proteins of rat liver ribosomes.
    Mol Gen Genet. 1978 Jul 6;163(1):101-12 PMID: 683173
  9. Assembly mapping of 30 S ribosomal proteins from Escherichia coli. Further studies.
    J Biol Chem. 1974 May 25;249(10):3103-11 PMID: 4598121
  10. The ribosomal proteins of Escherichia coli. I. Purification of the 30S ribosomal proteins.
    Biochemistry. 1969 Jul;8(7):2897-905 PMID: 4897206
  11. Assembly mapping of 30S ribosomal proteins from E. coli.
    Nature. 1970 Jun 27;226(5252):1214 PMID: 4912319
  12. Architecture of prokaryotic ribosomes.
    Annu Rev Biochem. 1983;52:35-65 PMID: 6351726
  13. A putative gene of tobacco chloroplast coding for ribosomal protein similar to E. coli ribosomal protein S19.
    Nucleic Acids Res. 1983 Mar 25;11(6):1913-8 PMID: 6300784
  14. Ribosome structure.
    Annu Rev Biochem. 1978;47:217-49 PMID: 354495
  15. The detection of DNA-binding proteins by protein blotting.
    Nucleic Acids Res. 1980 Jan 11;8(1):1-20 PMID: 6243775
  16. Evidence that 16S RNA from E. coli can assume two different biologically active conformations.
    Nucleic Acids Res. 1976 Aug;3(8):1883-902 PMID: 787927
  17. Nucleotide sequences of chloroplast 5S ribosomal ribonucleic acid in flowering plants.
    Biochem J. 1979 Dec 1;183(3):595-604 PMID: 540034
  18. The structure of ribosomal RNA and its organization relative to ribosomal protein.
    Prog Nucleic Acid Res Mol Biol. 1983;28:1-48 PMID: 6348873
  19. A method to identify individual proteins in four different two-dimensional gel electrophoresis systems: application to Escherichia coli ribosomal proteins.
    Anal Biochem. 1979 Jan 1;92(1):174-82 PMID: 371462
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1984-10-11
Pages
7293-304
Language
English
Region
England
NLM ID
0411011
PMCID
PMC320162
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