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PMID: 16760902 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Dynamic analysis of optimality in myocardial energy metabolism under normal and ischemic conditions.

Molecular systems biology ·Vol. 2 ·2006-00-00 ·Pages 2006.0031

Luo RY, Liao S, Tao GY, Li YY, Zeng S, Li YX, Luo Q

Abstract

To better understand the dynamic regulation of optimality in metabolic networks under perturbed conditions, we reconstruct the energetic-metabolic network in mammalian myocardia using dynamic flux balance analysis (DFBA). Additionally, we modified the optimal objective from the maximization of ATP production to the minimal fluctuation of the profile of metabolite concentration under ischemic conditions, extending the hypothesis of original minimization of metabolic adjustment to create a composite modeling approach called M-DFBA. The simulation results are more consistent with experimental data than are those of the DFBA model, particularly the retentive predominant contribution of fatty acid to oxidative ATP synthesis, the exact mechanism of which has not been elucidated and seems to be unpredictable by the DFBA model. These results suggest that the systemic states of metabolic networks do not always remain optimal, but may become suboptimal when a transient perturbation occurs. This finding supports the relevance of our hypothesis and could contribute to the further exploration of the underlying mechanism of dynamic regulation in metabolic networks.

MeSH Terms
Computer Simulation Energy Metabolism Models, Cardiovascular Myocardial Ischemia/metabolism Myocardium/metabolism
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Luo Ruo-Yu
Hubei Bioinformatics and Molecular Imaging Key Laboratory, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, China.
Liao Sha
Tao Guan-Yang
Li Yuan-Yuan
Zeng Shaoqun
Li Yi-Xue
Luo Qingming
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Article Info
Journal
Molecular systems biology
Abbr.
Mol Syst Biol
ISSN
1744-4292
Published
2006-00-00
Epub
2006-00-06
Pages
2006.0031
Language
English
Region
England
NLM ID
101235389
PMCID
PMC1681503
Subset
IM
Corrections
CommentIn
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