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PMID: 16905539 Published · ppublish English Comparative Study Journal Article Research Support, Non-U.S. Gov't

Structural and functional analysis of a conjugated bile salt hydrolase from Bifidobacterium longum reveals an evolutionary relationship with penicillin V acylase.

The Journal of biological chemistry ·Vol. 281 ·No. 43 ·2006-10-27 ·Pages 32516-25

Kumar RS, Brannigan JA, Prabhune AA, Pundle AV, Dodson GG, Dodson EJ, Suresh CG

Abstract

Bile salt hydrolase (BSH) is an enzyme produced by the intestinal microflora that catalyzes the deconjugation of glycine- or taurine-linked bile salts. The crystal structure of BSH reported here from Bifidobacterium longum reveals that it is a member of N-terminal nucleophil hydrolase structural superfamily possessing the characteristic alphabetabetaalpha tetra-lamellar tertiary structure arrangement. Site-directed mutagenesis of the catalytic nucleophil residue, however, shows that it has no role in zymogen processing into its corresponding active form. Substrate specificity was studied using Michaelis-Menten and inhibition kinetics and fluorescence spectroscopy. These data were compared with the specificity profile of BSH from Clostridium perfrigens and pencillin V acylase from Bacillus sphaericus, for both of which the three-dimensional structures are available. Comparative analysis shows a gradation in activity toward common substrates, throwing light on a possible common route toward the evolution of pencillin V acylase and BSH.

MeSH Terms
Amidohydrolases/chemistry,genetics,metabolism Amino Acid Sequence Bifidobacterium/enzymology Binding Sites Clostridium perfringens/enzymology Crystallography, X-Ray Dimerization Evolution, Molecular Hydrogen Bonding Hydrophobic and Hydrophilic Interactions Kinetics Models, Molecular Molecular Sequence Data Molecular Structure Mutagenesis, Site-Directed Penicillin Amidase/chemistry,genetics,metabolism Protein Binding Protein Conformation Protein Structure, Quaternary Protein Structure, Secondary Sequence Homology, Amino Acid Spectrometry, Fluorescence Static Electricity Substrate Specificity
Chemicals
Amidohydrolases Penicillin Amidase choloylglycine hydrolase
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Kumar R Suresh
Division of Biochemical Sciences, National Chemical Laboratory, Pune 411 008, India.
Brannigan James A
Prabhune Asmita A
Pundle Archana V
Dodson Guy G
Dodson Eleanor J
Suresh C G
Article Info
Journal
The Journal of biological chemistry
Abbr.
J Biol Chem
ISSN
0021-9258
Published
2006-10-27
Epub
2006-00-11
Pages
32516-25
Language
English
Region
United States
NLM ID
2985121R
Subset
IM
Grants
Wellcome Trust · United Kingdom
Databases
PDB
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