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PMID: 16914721 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Upf1, an RNA helicase required for nonsense-mediated mRNA decay, modulates the transcriptional response to oxidative stress in fission yeast.

Molecular and cellular biology ·Vol. 26 ·No. 17 ·2006-09-00 ·Pages 6347-56

Rodríguez-Gabriel MA, Watt S, Bähler J, Russell P

Abstract

In the fission yeast Schizosaccharomyces pombe, oxidative stress triggers the activation of the Spc1/Sty1 mitogen-activated protein kinase, which in turn phosphorylates the Atf1/Pcr1 heterodimeric transcription factor to effect global changes in the patterns of gene expression. This transcriptional response is also controlled by Csx1, an RNA-binding protein that directly associates with and stabilizes atf1(+) mRNA. Here we report the surprising observation that this response also requires Upf1, a component of the nonsense-mediated mRNA decay (NMD) system. Accordingly, upf1Delta and csx1Delta strains are similarly sensitive to oxidative stress, and the effects of the mutations are not additive, suggesting that Upf1 and Csx1 work in the same pathway to stabilize atf1(+) mRNA during oxidative stress. Consistent with these observations, whole-genome expression profiling studies have shown that Upf1 controls the expression of more than 100 genes that are transcriptionally induced in response to oxidative stress, the large majority of which are also controlled by Atf1 and Csx1. The unexpected connection between an NMD factor and the oxidative stress response in fission yeast may provide important new clues about the physiological function of NMD in other species.

MeSH Terms
Activating Transcription Factor 1/genetics Cell Survival Codon, Nonsense/genetics Gene Expression Profiling Gene Expression Regulation, Fungal Oxidative Stress Phenotype RNA Helicases/metabolism RNA Stability RNA, Fungal/metabolism RNA, Messenger/genetics,metabolism RNA-Binding Proteins/genetics Schizosaccharomyces/cytology,metabolism Schizosaccharomyces pombe Proteins/genetics,metabolism Transcription, Genetic
Chemicals
Activating Transcription Factor 1 Cip1 protein, S pombe Cip2 protein, S pombe Codon, Nonsense RNA, Fungal RNA, Messenger RNA-Binding Proteins Schizosaccharomyces pombe Proteins Upf1 protein, S pombe RNA Helicases
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Rodríguez-Gabriel Miguel A
Department of Molecular Biology, MB-3, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.
Watt Stephen
Bähler Jürg
Russell Paul
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Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
2006-09-00
Pages
6347-56
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC1592850
Subset
IM
Grants
Wellcome Trust · 077118 · United Kingdom
Cancer Research UK · A6517 · United Kingdom
NIEHS NIH HHS · P42 ES010337 · United States
NIEHS NIH HHS · ES10337 · United States
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