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PMID: 16951416 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

HCOP: a searchable database of human orthology predictions.

Briefings in bioinformatics ·Vol. 8 ·No. 1 ·2007-01-00 ·Pages 2-5

Eyre TA, Wright MW, Lush MJ, Bruford EA

Abstract

The HUGO Gene Nomenclature Committee (HGNC) Comparison of Orthology Predictions (HCOP) search tool combines the human, mouse, rat and chicken orthology assertions made by PhIGs, HomoloGene, Ensembl, Inparanoid, Mouse Genome Informatics (MGI) and HGNC, enabling users to identify predicted ortholog pairs for a specified gene or genes. The HCOP resource provides a useful method to integrate, compare and access a variety of disparate sources of human orthology data. The HCOP search tool, data and documentation are available at http://www.gene.ucl.ac.uk/hcop.

MeSH Terms
Databases, Genetic Evolution, Molecular Genes Genomics/methods Humans Sequence Homology, Nucleic Acid Terminology as Topic
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Eyre Tina A
HUGO Gene Nomenclature Committee (HGNC), Department of Biology, University College London, Wolfson House, 4 Stephenson Way, London.
Wright Mathew W
Lush Michael J
Bruford Elspeth A
Article Info
Journal
Briefings in bioinformatics
Abbr.
Brief Bioinform
ISSN
1467-5463
Published
2007-01-00
Epub
2006-00-02
Pages
2-5
Language
English
Region
England
NLM ID
100912837
Subset
IM
Grants
NHGRI NIH HHS · P41 HG003345 · United States
Wellcome Trust · United Kingdom
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