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PMID: 16984119 Published · ppublish English Evaluation Study Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Immobilization and clustering of structurally defined oligosaccharides for sugar chips: an improved method for surface plasmon resonance analysis of protein-carbohydrate interactions.

Bioconjugate chemistry ·Vol. 17 ·No. 5 ·2006-00-00 ·Pages 1125-35

Suda Y, Arano A, Fukui Y, Koshida S, Wakao M, Nishimura T, Kusumoto S, Sobel M

Abstract

Oligosaccharides are increasingly being recognized as important partners in receptor-ligand binding and cellular signaling. Surface plasmon resonance (SPR) is a very powerful tool for the real-time study of the specific interactions between biological molecules. We report here an advanced method for the immobilization of oligosaccharides in clustered structures for SPR and their application to the analysis of heparin-protein interactions. Reductive amination reactions and linker molecules were designed and optimized. Using mono-, tri-, or tetravalent linker compounds, we incorporated synthetic structurally defined disaccharide units of heparin and immobilized them as ligands for SPR. Their binding to an important hemostatic protein, von Willebrand factor (vWf), and its known heparin-binding domain was quantitatively analyzed. These multivalent ligand conjugates exhibited reproducible binding behavior, with consistency of the surface conditions of the SPR chip. This novel technique for oligosaccharide immobilization in SPR studies is accurate, specific, and easily applicable to both synthetic and naturally derived oligosaccharides.

MeSH Terms
Animals Heparin/chemistry,metabolism Microarray Analysis/instrumentation,methods Molecular Structure Oligosaccharides/chemistry,metabolism Protein Binding Proteins/chemistry,metabolism Surface Plasmon Resonance/methods
Chemicals
Oligosaccharides Proteins Heparin
Authors & Affiliations
8 authors, click to expand affiliations / ORCID
Suda Yasuo
Department of Nanostructure and Advanced Materials, Graduate School of Science and Engineering and Venture Business Laboratory, Kagoshima University, Kohrimoto, Kagoshima 890-0065, Japan. [email protected]
Arano Akio
Fukui Yasuhiro
Koshida Shuhei
Wakao Masahiro
Nishimura Tomoaki
Kusumoto Shoichi
Sobel Michael
Article Info
Journal
Bioconjugate chemistry
Abbr.
Bioconjug Chem
ISSN
1043-1802
Published
2006-00-00
Pages
1125-35
Language
English
Region
United States
NLM ID
9010319
Subset
IM
Grants
NHLBI NIH HHS · HL079812 · United States
NHLBI NIH HHS · R01HL39903 · United States
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