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PMID: 17060607 Published · ppublish English Journal Article

Crystal structure of a photoactivated deprotonated intermediate of rhodopsin.

Salom D, Lodowski DT, Stenkamp RE, Le Trong I, Golczak M, Jastrzebska B, Harris T, Ballesteros JA, Palczewski K

Abstract

The changes that lead to activation of G protein-coupled receptors have not been elucidated at the structural level. In this work we report the crystal structures of both ground state and a photoactivated deprotonated intermediate of bovine rhodopsin at a resolution of 4.15 A. In the photoactivated state, the Schiff base linking the chromophore and Lys-296 becomes deprotonated, reminiscent of the G protein-activating state, metarhodopsin II. The structures reveal that the changes that accompany photoactivation are smaller than previously predicted for the metarhodopsin II state and include changes on the cytoplasmic surface of rhodopsin that possibly enable the coupling to its cognate G protein, transducin. Furthermore, rhodopsin forms a potentially physiologically relevant dimer interface that involves helices I, II, and 8, and when taken with the prior work that implicates helices IV and V as the physiological dimer interface may account for one of the interfaces of the oligomeric structure of rhodopsin seen in the membrane by atomic force microscopy. The activation and oligomerization models likely extend to the majority of other G protein-coupled receptors.

MeSH Terms
Animals Cattle Crystallization Crystallography, X-Ray Dimerization Models, Molecular Photochemistry Protein Folding Protein Structure, Quaternary Protein Structure, Tertiary Protons Retinoids/chemistry,metabolism Rhodopsin/chemistry,metabolism Spectrum Analysis Structural Homology, Protein
Chemicals
Protons Retinoids Rhodopsin
Authors & Affiliations
9 authors, click to expand affiliations / ORCID
Salom David
Novasite Pharmaceuticals Inc., San Diego, CA 92121, USA.
Lodowski David T
Stenkamp Ronald E
Le Trong Isolde
Golczak Marcin
Jastrzebska Beata
Harris Tim
Ballesteros Juan A
Palczewski Krzysztof
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Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
2006-10-31
Epub
2006-00-23
Pages
16123-8
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC1637547
Subset
IM
Grants
NEI NIH HHS · R01 EY008061 · United States
NIGMS NIH HHS · R01 GM063020 · United States
Databases
PDB
Analysis Services
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