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PMID: 17101447 Published · ppublish English Journal Article

Quantitative genetic analysis in Saccharomyces cerevisiae using epistatic miniarray profiles (E-MAPs) and its application to chromatin functions.

Methods (San Diego, Calif.) ·Vol. 40 ·No. 4 ·2006-12-00 ·Pages 344-52

Schuldiner M, Collins SR, Weissman JS, Krogan NJ

Abstract

The use of the budding yeast Saccharomyces cerevisiae as a simple eukaryotic model system for the study of chromatin assembly and regulation has allowed rapid discovery of genes that influence this complex process. The functions of many of the proteins encoded by these genes have not yet been fully characterized. Here, we describe a high-throughput methodology that can be used to illuminate gene function and discuss its application to a set of genes involved in the creation, maintenance and remodeling of chromatin structure. Our technique, termed E-MAPs, involves the generation of quantitative genetic interaction maps that reveal the function and organization of cellular proteins and networks.

MeSH Terms
Chromatin/genetics,metabolism Chromatin Assembly and Disassembly Computational Biology Epistasis, Genetic Oligonucleotide Array Sequence Analysis Protein Interaction Mapping Saccharomyces cerevisiae/genetics,metabolism Saccharomyces cerevisiae Proteins/genetics
Chemicals
Chromatin Saccharomyces cerevisiae Proteins
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Schuldiner M
Department of Cellular and Molecular Pharmacology, The California Institute for Quantitative Biomedical Research, UCSF, Mission Bay Campus, Byers Hall, 1700 4th Street, San Francisco, California 94143-2540, USA. [email protected]
Collins S R
Weissman J S
Krogan N J
Article Info
Journal
Methods (San Diego, Calif.)
Abbr.
Methods
ISSN
1046-2023
Published
2006-12-00
Pages
344-52
Language
English
Region
United States
NLM ID
9426302
Subset
IM
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