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PMID: 17310144 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, U.S. Gov't, Non-P.H.S.

MAPK-mediated bimodal gene expression and adaptive gradient sensing in yeast.

Nature ·Vol. 446 ·No. 7131 ·2007-03-01 ·Pages 46-51

Paliwal S, Iglesias PA, Campbell K, Hilioti Z, Groisman A, Levchenko A

Abstract

The mating pathway in Saccharomyces cerevisiae has been the focus of considerable research effort, yet many quantitative aspects of its regulation still remain unknown. Using an integrated approach involving experiments in microfluidic chips and computational modelling, we studied gene expression and phenotypic changes associated with the mating response under well-defined pheromone gradients. Here we report a combination of switch-like and graded pathway responses leading to stochastic phenotype determination in a specific range of pheromone concentrations. Furthermore, we show that these responses are critically dependent on mitogen-activated protein kinase (MAPK)-mediated regulation of the activity of the pheromone-response-specific transcription factor, Ste12, as well as on the autoregulatory feedback of Ste12. In particular, both the switch-like characteristics and sensitivity of gene expression in shmooing cells to pheromone concentration were significantly diminished in cells lacking Kss1, one of the MAP kinases activated in the mating pathway. In addition, the dynamic range of gradient sensing of Kss1-deficient cells was reduced compared with wild type. We thus provide unsuspected functional significance for this kinase in regulation of the mating response.

MeSH Terms
Adaptation, Biological/drug effects,physiology Gene Expression Regulation, Fungal/drug effects Microfluidics Mitogen-Activated Protein Kinases/deficiency,genetics,metabolism Models, Genetic Oligonucleotide Array Sequence Analysis Phenotype Pheromones/metabolism,pharmacology Saccharomyces cerevisiae/drug effects,enzymology,genetics,physiology Saccharomyces cerevisiae Proteins/genetics,metabolism Transcription Factors/genetics,metabolism
Chemicals
Pheromones STE12 protein, S cerevisiae Saccharomyces cerevisiae Proteins Transcription Factors FUS3 protein, S cerevisiae KSS1 protein, S cerevisiae Mitogen-Activated Protein Kinases
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Paliwal Saurabh
Department of Biomedical Engineering and Whitaker Institute of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland 21218, USA.
Iglesias Pablo A
Campbell Kyle
Hilioti Zoe
Groisman Alex
Levchenko Andre
Article Info
Journal
Nature
Abbr.
Nature
ISSN
1476-4687
Published
2007-03-01
Epub
2007-00-18
Pages
46-51
Language
English
Region
England
NLM ID
0410462
Subset
IM
Grants
NIGMS NIH HHS · R01 GM072024 · United States
NCRR NIH HHS · U54 RR020839 · United States
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