Abstract
The transcription factor 7-like 2 gene (TCF7L2) has been shown to be strongly associated with an increased risk of type 2 diabetes in white populations. To further investigate the involvement of TCF7L2 in conferring susceptibility to type 2 diabetes, we examined the association of TCF7L2 polymorphisms with type 2 diabetes in a Japanese population. We analysed four SNPs (rs12255372, rs7903146, rs7901695 and rs11196205) and one tetranucleotide repeat polymorphism (DG10S478) in 1,630 Japanese subjects with type 2 diabetes and 1,064 control subjects. All investigated polymorphisms were significantly associated with type 2 diabetes, and rs12255372 showed the strongest association (T vs G, chi2 = 9.20, p = 0.0024, odds ratio = 1.70, 95% CI = 1.20-2.41), although the frequency of the risk allele in our population was much lower than that in white populations. The microsatellite polymorphism showed an almost complete linkage disequilibrium to rs1255372 when the alleles with longer repeats (+8, +12) were considered as minor alleles and showed an association with type 2 diabetes (chi2 = 5.34, p = 0.021, odds ratio = 1.50, 95% CI = 1.06-2.12). These results indicate that TCF7L2 might be a strong candidate for conferring susceptibility to type 2 diabetes across different ethnicities.
MeSH Terms
Aged
Asians
DNA/blood,genetics,isolation & purification
Diabetes Mellitus, Type 2/epidemiology,genetics
Ethnicity/statistics & numerical data
Female
Genetic Linkage
Genetic Predisposition to Disease
Genotype
Glycated Hemoglobin A/analysis
Humans
Japan/epidemiology
Male
Middle Aged
Polymorphism, Single Nucleotide
Risk Assessment
TCF Transcription Factors/genetics
Transcription Factor 7-Like 2 Protein
Chemicals
Glycated Hemoglobin A
TCF Transcription Factors
TCF7L2 protein, human
Transcription Factor 7-Like 2 Protein
DNA
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Hayashi T
Laboratory for Diabetic Nephropathy, SNP Research Centre, The Institute of Physical and Chemical Research, Yokohama, Kanagawa 230-0045, Japan.
Iwamoto Y
Kaku K
Hirose H
Maeda S
References (28)
28 references, click to expand
-
Polymorphisms in the transcription factor 7-like 2 (TCF7L2) gene are associated with type 2 diabetes in the Amish: replication and evidence for a role in both insulin secretion and insulin resistance.
Diabetes. 2006 Sep;55(9):2654-9
PMID: 16936218
-
Localization of a susceptibility gene for type 2 diabetes to chromosome 5q34-q35.2.
Am J Hum Genet. 2003 Aug;73(2):323-35
PMID: 12851856
-
Definition, diagnosis and classification of diabetes mellitus and its complications. Part 1: diagnosis and classification of diabetes mellitus provisional report of a WHO consultation.
Diabet Med. 1998 Jul;15(7):539-53
PMID: 9686693
-
Genetic variations in the gene encoding TFAP2B are associated with type 2 diabetes mellitus.
J Hum Genet. 2005;50(6):283-92
PMID: 15940393
-
Association of transcription factor 7-like 2 (TCF7L2) variants with type 2 diabetes in a Finnish sample.
Diabetes. 2006 Sep;55(9):2649-53
PMID: 16936217
-
Association of the gene encoding wingless-type mammary tumor virus integration-site family member 5B (WNT5B) with type 2 diabetes.
Am J Hum Genet. 2004 Nov;75(5):832-43
PMID: 15386214
-
Transcription factor TCF7L2 genetic study in the French population: expression in human beta-cells and adipose tissue and strong association with type 2 diabetes.
Diabetes. 2006 Oct;55(10):2903-8
PMID: 17003360
-
Variant of transcription factor 7-like 2 (TCF7L2) gene confers risk of type 2 diabetes.
Nat Genet. 2006 Mar;38(3):320-3
PMID: 16415884
-
A haplotype map of the human genome.
Nature. 2005 Oct 27;437(7063):1299-320
PMID: 16255080
-
Linkage of type 2 diabetes mellitus and of age at onset to a genetic location on chromosome 10q in Mexican Americans.
Am J Hum Genet. 1999 Apr;64(4):1127-40
PMID: 10090898
-
Genetic variation in the gene encoding calpain-10 is associated with type 2 diabetes mellitus.
Nat Genet. 2000 Oct;26(2):163-75
PMID: 11017071
-
TCF7L2 polymorphisms and progression to diabetes in the Diabetes Prevention Program.
N Engl J Med. 2006 Jul 20;355(3):241-50
PMID: 16855264
-
Association of hTcf-4 gene expression and mutation with clinicopathological characteristics of hepatocellular carcinoma.
World J Gastroenterol. 2002 Oct;8(5):804-7
PMID: 12378619
-
Combining information from common type 2 diabetes risk polymorphisms improves disease prediction.
PLoS Med. 2006 Oct;3(10 ):e374
PMID: 17020404
-
Association analysis of 6,736 U.K. subjects provides replication and confirms TCF7L2 as a type 2 diabetes susceptibility gene with a substantial effect on individual risk.
Diabetes. 2006 Sep;55(9):2640-4
PMID: 16936215
-
TCF-4 mediates cell type-specific regulation of proglucagon gene expression by beta-catenin and glycogen synthase kinase-3beta.
J Biol Chem. 2005 Jan 14;280(2):1457-64
PMID: 15525634
-
The human T-cell transcription factor-4 gene: structure, extensive characterization of alternative splicings, and mutational analysis in colorectal cancer cell lines.
Cancer Res. 2000 Jul 15;60(14):3872-9
PMID: 10919662
-
Single nucleotide polymorphisms in the gene encoding Krüppel-like factor 7 are associated with type 2 diabetes.
Diabetologia. 2005 Jul;48(7):1315-22
PMID: 15937668
-
Association between a single-nucleotide polymorphism in the promoter of the human interleukin-3 gene and rheumatoid arthritis in Japanese patients, and maximum-likelihood estimation of combinatorial effect that two genetic loci have on susceptibility to the disease.
Am J Hum Genet. 2001 Mar;68(3):674-85
PMID: 11179015
-
The glucagon-like peptides.
Endocr Rev. 1999 Dec;20(6):876-913
PMID: 10605628
-
Genetic factors in type 2 diabetes: the end of the beginning?
Science. 2005 Jan 21;307(5708):370-3
PMID: 15662000
-
The beta-catenin/TCF-4 complex imposes a crypt progenitor phenotype on colorectal cancer cells.
Cell. 2002 Oct 18;111(2):241-50
PMID: 12408868
-
Missense mutations in the pancreatic islet beta cell inwardly rectifying K+ channel gene (KIR6.2/BIR): a meta-analysis suggests a role in the polygenic basis of Type II diabetes mellitus in Caucasians.
Diabetologia. 1998 Dec;41(12):1511-5
PMID: 9867219
-
The common PPARgamma Pro12Ala polymorphism is associated with decreased risk of type 2 diabetes.
Nat Genet. 2000 Sep;26(1):76-80
PMID: 10973253
-
Variant of transcription factor 7-like 2 (TCF7L2) gene and the risk of type 2 diabetes in large cohorts of U.S. women and men.
Diabetes. 2006 Sep;55(9):2645-8
PMID: 16936216
-
Restricted high level expression of Tcf-4 protein in intestinal and mammary gland epithelium.
Am J Pathol. 1999 Jan;154(1):29-35
PMID: 9916915
-
Association testing of variants in the hepatocyte nuclear factor 4alpha gene with risk of type 2 diabetes in 7,883 people.
Diabetes. 2005 Mar;54(3):886-92
PMID: 15734869
-
Common single nucleotide polymorphisms in TCF7L2 are reproducibly associated with type 2 diabetes and reduce the insulin response to glucose in nondiabetic individuals.
Diabetes. 2006 Oct;55(10):2890-5
PMID: 17003358