Home LiteratureArticle Details
PMID: 17537914 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Structural elucidation of the m157 mouse cytomegalovirus ligand for Ly49 natural killer cell receptors.

Adams EJ, Juo ZS, Venook RT, Boulanger MJ, Arase H, Lanier LL, Garcia KC

Abstract

Natural killer (NK) cells express activating and inhibitory receptors that, in concert, survey cells for proper expression of cell surface major histocompatibility complex (MHC) class I molecules. The mouse cytomegalovirus encodes an MHC-like protein, m157, which is the only known viral antigen to date capable of engaging both activating (Ly49H) and inhibitory (Ly49I) NK cell receptors. We have determined the 3D structure of m157 and studied its biochemical and cellular interactions with the Ly49H and Ly49I receptors. m157 has a characteristic MHC-fold, yet possesses several unique structural features not found in other MHC class I-like molecules. m157 does not bind peptides or other small ligands, nor does it associate with beta(2)-microglobulin. Instead, m157 engages in extensive intra- and intermolecular interactions within and between its domains to generate a compact minimal MHC-like molecule. m157's binding affinity for Ly49I (K(d) approximately 0.2 microM) is significantly higher than that of classical inhibitory Ly49-MHC interactions. Analysis of viral escape mutations on m157 that render it resistant to NK killing reveals that it is likely to be recognized by Ly49H in a binding mode that differs from Ly49/MHC-I. In addition, Ly49H+ NK cells can efficiently lyse RMA cells expressing m157, despite the presence of native MHC class I. Collectively, our results show that m157 represents a structurally divergent form of MHC class I-like proteins that directly engage Ly49 receptors with appreciable affinity in a noncanonical fashion.

MeSH Terms
Animals Antigens, Ly/chemistry Baculoviridae/genetics Binding Sites Cell Line, Tumor Crystallography, X-Ray Disulfides/chemistry Histocompatibility Antigens Class I/immunology Hydrogen Bonding Killer Cells, Natural/immunology Lectins, C-Type/chemistry Ligands Lymphoma, T-Cell/pathology Mice Models, Molecular Muromegalovirus/immunology NK Cell Lectin-Like Receptor Subfamily A Protein Binding Protein Conformation Protein Structure, Secondary Protein Structure, Tertiary Receptors, Immunologic/chemistry,genetics,immunology Receptors, NK Cell Lectin-Like
Chemicals
Antigens, Ly Disulfides Histocompatibility Antigens Class I Klra8 protein, mouse Lectins, C-Type Ligands NK Cell Lectin-Like Receptor Subfamily A Receptors, Immunologic Receptors, NK Cell Lectin-Like
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Adams Erin J
Departments of Molecular and Cellular Physiology and Structural Biology, Howard Hughes Medical Institute, Stanford University School of Medicine, Stanford, CA 94305, USA.
Juo Z Sean
Venook Rayna Takaki
Boulanger Martin J
Arase Hisashi
Lanier Lewis L
Garcia K Christopher
References (34)
34 references, click to expand
  1. Crystal structure of human ZAG, a fat-depleting factor related to MHC molecules.
    Science. 1999 Mar 19;283(5409):1914-9 PMID: 10206894
  2. Automated protein model building combined with iterative structure refinement.
    Nat Struct Biol. 1999 May;6(5):458-63 PMID: 10331874
  3. Crystal structure of the MHC class I homolog MIC-A, a gammadelta T cell ligand.
    Immunity. 1999 May;10(5):577-84 PMID: 10367903
  4. Crystal structure of a lectin-like natural killer cell receptor bound to its MHC class I ligand.
    Nature. 1999 Dec 9;402(6762):623-31 PMID: 10604468
  5. Crystal structure of a gammadelta T cell receptor ligand T22: a truncated MHC-like fold.
    Science. 2000 Jan 14;287(5451):310-4 PMID: 10634787
  6. Susceptibility to mouse cytomegalovirus is associated with deletion of an activating natural killer cell receptor of the C-type lectin superfamily.
    Nat Genet. 2001 May;28(1):42-5 PMID: 11326273
  7. Vital involvement of a natural killer cell activation receptor in resistance to viral infection.
    Science. 2001 May 4;292(5518):934-7 PMID: 11340207
  8. MHC class I recognition by NK receptors in the Ly49 family is strongly influenced by the beta 2-microglobulin subunit.
    J Immunol. 2001 Jun 15;166(12):7327-34 PMID: 11390483
  9. Murine cytomegalovirus is regulated by a discrete subset of natural killer cells reactive with monoclonal antibody to Ly49H.
    J Exp Med. 2001 Jul 2;194(1):29-44 PMID: 11435470
  10. Ectopic expression of retinoic acid early inducible-1 gene (RAE-1) permits natural killer cell-mediated rejection of a MHC class I-bearing tumor in vivo.
    Proc Natl Acad Sci U S A. 2001 Sep 25;98(20):11521-6 PMID: 11562472
  11. Binding of the natural killer cell inhibitory receptor Ly49A to its major histocompatibility complex class I ligand. Crucial contacts include both H-2Dd AND beta 2-microglobulin.
    J Biol Chem. 2002 Jan 11;277(2):1433-42 PMID: 11696552
  12. Direct recognition of cytomegalovirus by activating and inhibitory NK cell receptors.
    Science. 2002 May 17;296(5571):1323-6 PMID: 11950999
  13. Recognition of a virus-encoded ligand by a natural killer cell activation receptor.
    Proc Natl Acad Sci U S A. 2002 Jun 25;99(13):8826-31 PMID: 12060703
  14. Major histocompatibility complex class I allele-specific cooperative and competitive interactions between immune evasion proteins of cytomegalovirus.
    J Exp Med. 2002 Sep 16;196(6):805-16 PMID: 12235213
  15. Inducible costimulator costimulates cytotoxic activity and IFN-gamma production in activated murine NK cells.
    J Immunol. 2002 Oct 1;169(7):3676-85 PMID: 12244160
  16. Transgenic expression of the activating natural killer receptor Ly49H confers resistance to cytomegalovirus in genetically susceptible mice.
    J Exp Med. 2003 Feb 17;197(4):515-26 PMID: 12591908
  17. The effect of the Cmv-1 resistance gene, which is linked to the natural killer cell gene complex, is mediated by natural killer cells.
    J Immunol. 1992 Jul 15;149(2):581-9 PMID: 1378069
  18. Variable MHC class I engagement by Ly49 natural killer cell receptors demonstrated by the crystal structure of Ly49C bound to H-2K(b).
    Nat Immunol. 2003 Dec;4(12):1213-22 PMID: 14595439
  19. Murine cytomegalovirus m157 mutation and variation leads to immune evasion of natural killer cells.
    Proc Natl Acad Sci U S A. 2003 Nov 11;100(23):13483-8 PMID: 14597723
  20. A peptide that antagonizes TCR-mediated reactions with both syngeneic and allogeneic agonists: functional and structural aspects.
    J Immunol. 2004 Mar 1;172(5):2994-3002 PMID: 14978103
  21. Escape of mutant double-stranded DNA virus from innate immune control.
    Immunity. 2004 Jun;20(6):747-56 PMID: 15189739
  22. The CCP4 suite: programs for protein crystallography.
    Acta Crystallogr D Biol Crystallogr. 1994 Sep 1;50(Pt 5):760-3 PMID: 15299374
  23. Expression of m157, a murine cytomegalovirus-encoded putative major histocompatibility class I (MHC-I)-like protein, is independent of viral regulation of host MHC-I.
    J Virol. 2006 Jan;80(1):545-50 PMID: 16352579
  24. Crystal structure of the murine cytomegalovirus MHC-I homolog m144.
    J Mol Biol. 2006 Apr 21;358(1):157-71 PMID: 16500675
  25. Structure, function, and diversity of class I major histocompatibility complex molecules.
    Annu Rev Biochem. 1990;59:253-88 PMID: 2115762
  26. [27] Maximum-likelihood heavy-atom parameter refinement for multiple isomorphous replacement and multiwavelength anomalous diffraction methods.
    Methods Enzymol. 1997;276:472-494 PMID: 27799110
  27. Structure of the human class I histocompatibility antigen, HLA-A2.
    Nature. 1987 Oct 8-14;329(6139):506-12 PMID: 3309677
  28. Selective rejection of H-2-deficient lymphoma variants suggests alternative immune defence strategy.
    Nature. 1986 Feb 20-26;319(6055):675-8 PMID: 3951539
  29. The three-dimensional structure of peptide-MHC complexes.
    Annu Rev Immunol. 1995;13:587-622 PMID: 7612235
  30. Nonclassical binding of formylated peptide in crystal structure of the MHC class Ib molecule H2-M3.
    Cell. 1995 Aug 25;82(4):655-64 PMID: 7664344
  31. Crystal structure of the complex of rat neonatal Fc receptor with Fc.
    Nature. 1994 Nov 24;372(6504):379-83 PMID: 7969498
  32. Crystal structure of mouse CD1: An MHC-like fold with a large hydrophobic binding groove.
    Science. 1997 Jul 18;277(5324):339-45 PMID: 9219685
  33. Crystal structure of the hemochromatosis protein HFE and characterization of its interaction with transferrin receptor.
    Cell. 1998 Apr 3;93(1):111-23 PMID: 9546397
  34. Crystallography & NMR system: A new software suite for macromolecular structure determination.
    Acta Crystallogr D Biol Crystallogr. 1998 Sep 1;54(Pt 5):905-21 PMID: 9757107
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
2007-06-12
Epub
2007-00-30
Pages
10128-33
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC1891256
Subset
IM
Grants
NIAID NIH HHS · R01 AI068129 · United States
NIAID NIH HHS · AI 068129 · United States
NIAID NIH HHS · AI 10655 04 · United States
Databases
PDB
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]