Abstract
Dimeric lectin-like oxidized low-density lipoprotein receptor-1 LOX-1 is the target receptor for oxidized low density lipoprotein in endothelial cells. In vivo assays revealed that in LOX-1 the basic spine arginine residues are important for binding, which is lost upon mutation of Trp150 with alanine. Molecular dynamics simulations of the wild-type LOX-1 and of the Trp150Ala mutant C-type lectin-like domains, have been carried out to gain insight into the severe inactivating effect. The mutation does not alter the dimer stability, but a different dynamical behaviour differentiates the two proteins. As described by the residues fluctuation, the dynamic cross correlation map and the principal component analysis in the wild-type the two monomers display a symmetrical motion that is not observed in the mutant. The symmetrical motion of monomers is completely damped by the structural rearrangement caused by the Trp150Ala mutation. An improper dynamical coupling of the monomers and different fluctuations of the basic spine residues are observed, with a consequent altered binding affinity.
MeSH Terms
Alanine/genetics,metabolism
Computer Simulation
Crystallography, X-Ray
Humans
Hydrogen Bonding
Lipoproteins, LDL/chemistry,genetics,metabolism
Models, Molecular
Mutation/genetics
Protein Binding
Protein Structure, Secondary
Protein Structure, Tertiary
Protein Subunits/chemistry,metabolism
Scavenger Receptors, Class E/chemistry,genetics,metabolism
Tryptophan/genetics,metabolism
Chemicals
Lipoproteins, LDL
OLR1 protein, human
Protein Subunits
Scavenger Receptors, Class E
oxidized low density lipoprotein
Tryptophan
Alanine
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Falconi Mattia
Department of Biology and Center of Biostatistics and Bioinformatics, University of Rome Tor Vergata, Via della Ricerca Scientifica, Rome, Italy, 00133.
[email protected]
Biocca Silvia
Novelli Giuseppe
Desideri Alessandro
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