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PMID: 18096908 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

HealthMap: global infectious disease monitoring through automated classification and visualization of Internet media reports.

Journal of the American Medical Informatics Association : JAMIA ·Vol. 15 ·No. 2 ·2008-00-00 ·Pages 150-7

Freifeld CC, Mandl KD, Reis BY, Brownstein JS

Abstract

Unstructured electronic information sources, such as news reports, are proving to be valuable inputs for public health surveillance. However, staying abreast of current disease outbreaks requires scouring a continually growing number of disparate news sources and alert services, resulting in information overload. Our objective is to address this challenge through the HealthMap.org Web application, an automated system for querying, filtering, integrating and visualizing unstructured reports on disease outbreaks. This report describes the design principles, software architecture and implementation of HealthMap and discusses key challenges and future plans. We describe the process by which HealthMap collects and integrates outbreak data from a variety of sources, including news media (e.g., Google News), expert-curated accounts (e.g., ProMED Mail), and validated official alerts. Through the use of text processing algorithms, the system classifies alerts by location and disease and then overlays them on an interactive geographic map. We measure the accuracy of the classification algorithms based on the level of human curation necessary to correct misclassifications, and examine geographic coverage. As part of the evaluation of the system, we analyzed 778 reports with HealthMap, representing 87 disease categories and 89 countries. The automated classifier performed with 84% accuracy, demonstrating significant usefulness in managing the large volume of information processed by the system. Accuracy for ProMED alerts is 91% compared to Google News reports at 81%, as ProMED messages follow a more regular structure. HealthMap is a useful free and open resource employing text-processing algorithms to identify important disease outbreak information through a user-friendly interface.

MeSH Terms
Communicable Diseases/classification,diagnosis,epidemiology Disease Outbreaks/statistics & numerical data Humans Internet Mass Media/classification Population Surveillance/methods Reproducibility of Results Software
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Freifeld Clark C
Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, 300 Longwood Ave., Boston, MA 02115, USA. [email protected]
Mandl Kenneth D
Reis Ben Y
Brownstein John S
References (11)
11 references, click to expand
  1. Emerging infectious pathogens of wildlife.
    Philos Trans R Soc Lond B Biol Sci. 2001 Jul 29;356(1411):1001-12 PMID: 11516378
  2. Rumors of disease in the global village: outbreak verification.
    Emerg Infect Dis. 2000 Mar-Apr;6(2):97-102 PMID: 10756142
  3. Filtering for medical news items using a machine learning approach.
    Proc AMIA Symp. 2002;:949-53 PMID: 12463964
  4. The Global Public Health Intelligence Network and early warning outbreak detection: a Canadian contribution to global public health.
    Can J Public Health. 2006 Jan-Feb;97(1):42-4 PMID: 16512327
  5. ProMED global monitoring of emerging diseases: design for a demonstration program.
    Health Policy. 1996 Dec;38(3):135-53 PMID: 10162418
  6. Hot spots in a wired world: WHO surveillance of emerging and re-emerging infectious diseases.
    Lancet Infect Dis. 2001 Dec;1(5):345-53 PMID: 11871807
  7. The internet and the global monitoring of emerging diseases: lessons from the first 10 years of ProMED-mail.
    Arch Med Res. 2005 Nov-Dec;36(6):724-30 PMID: 16216654
  8. Internet encyclopaedias go head to head.
    Nature. 2005 Dec 15;438(7070):900-1 PMID: 16355180
  9. ProMED-mail: an early warning system for emerging diseases.
    Clin Infect Dis. 2004 Jul 15;39(2):227-32 PMID: 15307032
  10. Emerging and resurging vector-borne diseases.
    Annu Rev Entomol. 1999;44:51-75 PMID: 9990716
  11. SARS and population health technology.
    J Med Internet Res. 2003 Apr-Jun;5(2):e14 PMID: 12857670
Article Info
Journal
Journal of the American Medical Informatics Association : JAMIA
Abbr.
J Am Med Inform Assoc
ISSN
1067-5027
Published
2008-00-00
Epub
2007-00-20
Pages
150-7
Language
English
Region
England
NLM ID
9430800
PMCID
PMC2274789
Subset
IM
Grants
NLM NIH HHS · R21 LM009263 · United States
NLM NIH HHS · 1 R01 LM007677 · United States
NLM NIH HHS · R21LM009263-01 · United States
NLM NIH HHS · N01-LM-3-3515 · United States
NLM NIH HHS · R01 LM007677 · United States
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