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PMID: 18287693 Published · ppublish English Journal Article

The TAIR database.

Methods in molecular biology (Clifton, N.J.) ·Vol. 406 ·2007-00-00 ·Pages 179-212

Poole RL

Abstract

The Arabidopsis Information Resource (TAIR) is a highly sophisticated, extensive, user friendly, Web-based resource for researchers working on the model plant Arabidopsis thaliana. The main gateway to this resource is through TAIR's homepage http://www.arabidopsis.org. It is a repository of large amounts of data including gene, mapping, protein, expression and community data in the form of a relational database. These data can be searched, downloaded and analysed using the tools provided. Here, the simple search (for retrieval of information), Seq Viewer (for the visualization of the five Arabidopsis chromosomes and associated annotations) and AraCyc (database of Arabidopsis biochemical pathways, with a graphical overview onto which large data sets, such as gene expression data, can be overlaid) tools are described with examples.

MeSH Terms
Arabidopsis/genetics,metabolism Arabidopsis Proteins/genetics,metabolism Chromosomes, Plant/genetics Databases, Factual Databases, Genetic Gene Expression Regulation, Plant Genome, Plant/genetics Information Storage and Retrieval
Chemicals
Arabidopsis Proteins
Authors & Affiliations
1 authors, click to expand affiliations / ORCID
Poole Rebecca L
Biological Sciences Building, Clifton, Bristol, UK.
Article Info
Journal
Methods in molecular biology (Clifton, N.J.)
Abbr.
Methods Mol Biol
ISSN
1064-3745
Published
2007-00-00
Pages
179-212
Language
English
Region
United States
NLM ID
9214969
Subset
IM
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