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PMID: 18319070 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

A critical appraisal of the scientific basis of commercial genomic profiles used to assess health risks and personalize health interventions.

American journal of human genetics ·Vol. 82 ·No. 3 ·2008-03-00 ·Pages 593-9

Janssens AC, Gwinn M, Bradley LA, Oostra BA, van Duijn CM, Khoury MJ

Abstract

Predictive genomic profiling used to produce personalized nutrition and other lifestyle health recommendations is currently offered directly to consumers. By examining previous meta-analyses and HuGE reviews, we assessed the scientific evidence supporting the purported gene-disease associations for genes included in genomic profiles offered online. We identified seven companies that offer predictive genomic profiling. We searched PubMed for meta-analyses and HuGE reviews of studies of gene-disease associations published from 2000 through June 2007 in which the genotypes of people with a disease were compared with those of a healthy or general-population control group. The seven companies tested at least 69 different polymorphisms in 56 genes. Of the 56 genes tested, 24 (43%) were not reviewed in meta-analyses. For the remaining 32 genes, we found 260 meta-analyses that examined 160 unique polymorphism-disease associations, of which only 60 (38%) were found to be statistically significant. Even the 60 significant associations, which involved 29 different polymorphisms and 28 different diseases, were generally modest, with synthetic odds ratios ranging from 0.54 to 0.88 for protective variants and from 1.04 to 3.2 for risk variants. Furthermore, genes in cardiogenomic profiles were more frequently associated with noncardiovascular diseases than with cardiovascular diseases, and though two of the five genes of the osteogenomic profiles did show significant associations with disease, the associations were not with bone diseases. There is insufficient scientific evidence to conclude that genomic profiles are useful in measuring genetic risk for common diseases or in developing personalized diet and lifestyle recommendations for disease prevention.

MeSH Terms
Commerce Genetic Diseases, Inborn/diagnosis,genetics,prevention & control Genetic Predisposition to Disease/genetics Genome, Human/genetics Genomics/trends Health Humans Polymorphism, Genetic Risk Factors
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Janssens A Cecile J W
Department of Public Health, Erasmus MC University Medical Center, PO Box 2040, 3000 CA Rotterdam, The Netherlands. [email protected]
Gwinn Marta
Bradley Linda A
Oostra Ben A
van Duijn Cornelia M
Khoury Muin J
References (26)
26 references, click to expand
  1. Converting a breast cancer microarray signature into a high-throughput diagnostic test.
    BMC Genomics. 2006 Oct 30;7:278 PMID: 17074082
  2. Will genetics revolutionize medicine?
    N Engl J Med. 2000 Jul 13;343(2):141-4 PMID: 10891526
  3. The case for strategic international alliances to harness nutritional genomics for public and personal health.
    Br J Nutr. 2005 Nov;94(5):623-32 PMID: 16277761
  4. Cytokine gene polymorphisms and acute liver graft rejection: a meta-analysis.
    Liver Transpl. 2005 Jan;11(1):19-26 PMID: 15690532
  5. An exploratory test for an excess of significant findings.
    Clin Trials. 2007;4(3):245-53 PMID: 17715249
  6. The genetic basis for smoking behavior: a systematic review and meta-analysis.
    Nicotine Tob Res. 2004 Aug;6(4):583-97 PMID: 15370155
  7. Replication validity of genetic association studies.
    Nat Genet. 2001 Nov;29(3):306-9 PMID: 11600885
  8. Genetic associations: false or true?
    Trends Mol Med. 2003 Apr;9(4):135-8 PMID: 12727138
  9. Seven haemostatic gene polymorphisms in coronary disease: meta-analysis of 66,155 cases and 91,307 controls.
    Lancet. 2006 Feb 25;367(9511):651-8 PMID: 16503463
  10. Associations between cytokine gene polymorphisms and recurrent pregnancy loss.
    J Reprod Immunol. 2003 Feb;58(1):69-77 PMID: 12609526
  11. Genotrim, a DNA-customized nutrigenomic product, targets genetic factors of obesity: hypothesizing a dopamine-glucose correlation demonstrating reward deficiency syndrome (RDS).
    Med Hypotheses. 2007;68(4):844-52 PMID: 17071010
  12. Predictive genetic testing for type 2 diabetes.
    BMJ. 2006 Sep 9;333(7567):509-10 PMID: 16960189
  13. Genetic testing for sale.
    Epidemiology. 2004 Jan;15(1):3-5 PMID: 14712140
  14. Misconceptions about the use of genetic tests in populations.
    Lancet. 2001 Mar 3;357(9257):709-12 PMID: 11247571
  15. Nutrigenomics and nutrigenetics.
    Curr Opin Lipidol. 2004 Apr;15(2):101-8 PMID: 15017352
  16. Warfarin dose and the pharmacogenomics of CYP2C9 and VKORC1 - rationale and perspectives.
    Thromb Res. 2007;120(1):1-10 PMID: 17161452
  17. Genetics of leptin and obesity: a HuGE review.
    Am J Epidemiol. 2005 Jul 15;162(2):101-14 PMID: 15972940
  18. Endothelial nitric oxide synthase gene polymorphisms and cardiovascular disease: a HuGE review.
    Am J Epidemiol. 2006 Nov 15;164(10):921-35 PMID: 17018701
  19. On the synthesis and interpretation of consistent but weak gene-disease associations in the era of genome-wide association studies.
    Int J Epidemiol. 2007 Apr;36(2):439-45 PMID: 17182636
  20. Predictive testing for complex diseases using multiple genes: fact or fiction?
    Genet Med. 2006 Jul;8(7):395-400 PMID: 16845271
  21. Implications of the Human Genome Project for medical science.
    JAMA. 2001 Feb 7;285(5):540-4 PMID: 11176855
  22. Assessment of cumulative evidence on genetic associations: interim guidelines.
    Int J Epidemiol. 2008 Feb;37(1):120-32 PMID: 17898028
  23. Genomic profiling to promote a healthy lifestyle: not ready for prime time.
    Nat Genet. 2003 Aug;34(4):347-50 PMID: 12923535
  24. The effect of CYP2C19 polymorphisms on H. pylori eradication rate in dual and triple first-line PPI therapies: a meta-analysis.
    Am J Gastroenterol. 2006 Jul;101(7):1467-75 PMID: 16863547
  25. CYP2C9 gene variants, drug dose, and bleeding risk in warfarin-treated patients: a HuGEnet systematic review and meta-analysis.
    Genet Med. 2005 Feb;7(2):97-104 PMID: 15714076
  26. A systematic review and meta-analysis of the relationship between lipoprotein lipase Asn291Ser variant and diseases.
    J Lipid Res. 2006 Sep;47(9):1908-14 PMID: 16741292
Article Info
Journal
American journal of human genetics
Abbr.
Am J Hum Genet
ISSN
1537-6605
Published
2008-03-00
Pages
593-9
Language
English
Region
United States
NLM ID
0370475
PMCID
PMC2427295
Subset
IM
Corrections
CommentIn
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