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PMID: 18391952 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Genome-wide association analysis identifies 20 loci that influence adult height.

Nature genetics ·Vol. 40 ·No. 5 ·2008-05-00 ·Pages 575-83

Weedon MN, Lango H, Lindgren CM, Wallace C, Evans DM, Mangino M, Freathy RM, Perry JR, Stevens S, Hall AS, Samani NJ, Shields B, Prokopenko I, Farrall M, Dominiczak A, Diabetes Genetics Initiative, Wellcome Trust Case Control Consortium, Johnson T, Bergmann S, Beckmann JS, Vollenweider P, Waterworth DM, Mooser V, Palmer CN, Morris AD, Ouwehand WH, Cambridge GEM Consortium, Zhao JH, Li S, Loos RJ, Barroso I, Deloukas P, Sandhu MS, Wheeler E, Soranzo N, Inouye M, Wareham NJ, Caulfield M, Munroe PB, Hattersley AT, McCarthy MI, Frayling TM

Abstract

Adult height is a model polygenic trait, but there has been limited success in identifying the genes underlying its normal variation. To identify genetic variants influencing adult human height, we used genome-wide association data from 13,665 individuals and genotyped 39 variants in an additional 16,482 samples. We identified 20 variants associated with adult height (P < 5 x 10(-7), with 10 reaching P < 1 x 10(-10)). Combined, the 20 SNPs explain approximately 3% of height variation, with a approximately 5 cm difference between the 6.2% of people with 17 or fewer 'tall' alleles compared to the 5.5% with 27 or more 'tall' alleles. The loci we identified implicate genes in Hedgehog signaling (IHH, HHIP, PTCH1), extracellular matrix (EFEMP1, ADAMTSL3, ACAN) and cancer (CDK6, HMGA2, DLEU7) pathways, and provide new insights into human growth and developmental processes. Finally, our results provide insights into the genetic architecture of a classic quantitative trait.

MeSH Terms
Adult Aged Body Height/genetics Extracellular Matrix Proteins/genetics Female Genome, Human Genotype Hedgehog Proteins/genetics Humans Male Middle Aged Neoplasm Proteins/genetics Polymorphism, Single Nucleotide
Chemicals
Extracellular Matrix Proteins Hedgehog Proteins Neoplasm Proteins
Authors & Affiliations
42 authors, click to expand affiliations / ORCID
Weedon Michael N
Genetics of Complex Traits, Institute of Biomedical and Clinical Science, Peninsula Medical School, Magdalen Road, Exeter EX1 2LU, UK.
Lango Hana
Lindgren Cecilia M
Wallace Chris
Evans David M
Mangino Massimo
Freathy Rachel M
Perry John R B
Stevens Suzanne
Hall Alistair S
Samani Nilesh J
Shields Beverly
Prokopenko Inga
Farrall Martin
Dominiczak Anna
Diabetes Genetics Initiative
Wellcome Trust Case Control Consortium
Johnson Toby
Bergmann Sven
Beckmann Jacques S
Vollenweider Peter
Waterworth Dawn M
Mooser Vincent
Palmer Colin N A
Morris Andrew D
Ouwehand Willem H
Cambridge GEM Consortium
Zhao Jing Hua
Li Shengxu
Loos Ruth J F
Barroso Inês
Deloukas Panagiotis
Sandhu Manjinder S
Wheeler Eleanor
Soranzo Nicole
Inouye Michael
Wareham Nicholas J
Caulfield Mark
Munroe Patricia B
Hattersley Andrew T
McCarthy Mark I
Frayling Timothy M
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Article Info
Journal
Nature genetics
Abbr.
Nat Genet
ISSN
1546-1718
Published
2008-05-00
Epub
2008-00-06
Pages
575-83
Language
English
Region
United States
NLM ID
9216904
PMCID
PMC2681221
Subset
IM
Grants
Medical Research Council · G9521010 · United Kingdom
Medical Research Council · G0600705 · United Kingdom
Wellcome Trust · 077011 · United Kingdom
Wellcome Trust · 077016 · United Kingdom
Wellcome Trust · 076113 · United Kingdom
British Heart Foundation · PG02/128 · United Kingdom
Medical Research Council · G9521010D · United Kingdom
Medical Research Council · G0701863 · United Kingdom
Wellcome Trust · 090532 · United Kingdom
British Heart Foundation · PG/02/128/14470 · United Kingdom
Medical Research Council · MC_U106188470 · United Kingdom
British Heart Foundation · FS/05/061/19501 · United Kingdom
Medical Research Council · G9521010(63660) · United Kingdom
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