Home LiteratureArticle Details
PMID: 18584147 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S.

Identification and mapping QTL for high-temperature adult-plant resistance to stripe rust in winter wheat (Triticum aestivum L.) cultivar 'Stephens'.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik ·Vol. 117 ·No. 5 ·2008-09-00 ·Pages 793-802

Santra DK, Chen XM, Santra M, Campbell KG, Kidwell KK

Abstract

High-temperature adult-plant (HTAP) resistance from the winter wheat (Triticum aestivum) cultivar 'Stephens' has protected wheat crops from stripe rust caused by Puccinia striiformis f. sp. tritici for 30 years. The objectives of this study were to identify quantitative trait loci (QTL) for HTAP resistance in Stephens through genetic linkage analysis and identify DNA markers linked to the QTL for use in marker-assisted breeding. Mapping populations consisted of 101 recombinant inbred lines (RILs) through single-seed descent from 'Stephens' (resistant) x 'Michigan Amber' (susceptible). F(5), F(6) and F(7) RILs were evaluated for stripe rust resistance at Pullman, WA in 1996, 1997 and 1998, respectively, whereas F(8) RILs were evaluated at Mt Vernon, WA, USA in 2005. The 101 F(8) RILs were evaluated with 250 resistance gene analog polymorphism (RGAP), 245 simple sequence repeat (SSR) and 1 sequence tagged site (STS) markers for genetic linkage map construction. Two QTL, which explained 48-61% of the total phenotypic variation of the HTAP resistance in Stephens, were identified. QYrst.wgp-6BS.1 was within a 3.9-cM region flanked by Xbarc101 and Xbarc136. QYrst.wgp-6BS.2 was mapped in a 17.5-cM region flanked by Xgwm132 and Xgdm113. Both two QTL were physically mapped to the short arm of chromosome 6B, but in different bins. Validation and polymorphism tests of the flanking markers in 43 wheat genotypes indicated that the molecular markers associated with these QTL should be useful in marker-assisted breeding programs to efficiently incorporate HTAP resistance into new wheat cultivars.

MeSH Terms
Chromosome Mapping Chromosomes, Plant Crosses, Genetic Genes, Plant Genetic Markers Genotype Immunity, Innate/genetics Lod Score Minisatellite Repeats Plant Diseases/genetics,microbiology Polymorphism, Genetic Quantitative Trait Loci Temperature Triticum/genetics,microbiology
Chemicals
Genetic Markers
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Santra D K
Department of Crop and Soil Sciences, Washington State University, Pullman, WA 99164-6420, USA.
Chen X M
Santra M
Campbell K G
Kidwell K K
References (20)
20 references, click to expand
  1. High-temperature adult-plant (HTAP) stripe rust resistance gene Yr36 from Triticum turgidum ssp. dicoccoides is closely linked to the grain protein content locus Gpc-B1.
    Theor Appl Genet. 2005 Dec;112(1):97-105 PMID: 16208504
  2. Stripe rust of wheat and barley in North America: a retrospective historical review.
    Annu Rev Phytopathol. 2002;40:75-118 PMID: 12147755
  3. Mapping mendelian factors underlying quantitative traits using RFLP linkage maps.
    Genetics. 1989 Jan;121(1):185-99 PMID: 2563713
  4. Microsatellite markers for genes lr34/yr18 and other quantitative trait Loci for leaf rust and stripe rust resistance in bread wheat.
    Phytopathology. 2003 Jul;93(7):881-90 PMID: 18943170
  5. Theoretical basis for separation of multiple linked gene effects in mapping quantitative trait loci.
    Proc Natl Acad Sci U S A. 1993 Dec 1;90(23):10972-6 PMID: 8248199
  6. A microsatellite map of wheat.
    Genetics. 1998 Aug;149(4):2007-23 PMID: 9691054
  7. Quantitative trait locus mapping based on resampling in a vast maize testcross experiment and its relevance to quantitative genetics for complex traits.
    Genetics. 2004 May;167(1):485-98 PMID: 15166171
  8. Effect of population size on the estimation of QTL: a test using resistance to barley stripe rust.
    Theor Appl Genet. 2005 Nov;111(7):1260-70 PMID: 16179997
  9. Precision mapping of quantitative trait loci.
    Genetics. 1994 Apr;136(4):1457-68 PMID: 8013918
  10. MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations.
    Genomics. 1987 Oct;1(2):174-81 PMID: 3692487
  11. Quantitative trait locus (QTL) mapping using different testers and independent population samples in maize reveals low power of QTL detection and large bias in estimates of QTL effects.
    Genetics. 1998 May;149(1):383-403 PMID: 9584111
  12. Linkage analysis with multiplexed short tandem repeat polymorphisms using infrared fluorescence and M13 tailed primers.
    Genomics. 1995 Dec 10;30(3):450-8 PMID: 8825630
  13. Genetics and molecular mapping of genes for race-specific all-stage resistance and non-race-specific high-temperature adult-plant resistance to stripe rust in spring wheat cultivar Alpowa.
    Theor Appl Genet. 2007 May;114(7):1277-87 PMID: 17318493
  14. Development of resistance gene analog polymorphism markers for the Yr9 gene resistance to wheat stripe rust.
    Genome. 2001 Aug;44(4):509-16 PMID: 11550883
  15. A high-density microsatellite consensus map for bread wheat (Triticum aestivum L.).
    Theor Appl Genet. 2004 Oct;109(6):1105-14 PMID: 15490101
  16. Development and mapping of microsatellite (SSR) markers in wheat.
    Theor Appl Genet. 2005 Feb;110(3):550-60 PMID: 15655666
  17. Molecular characterization of a set of wheat deletion stocks for use in chromosome bin mapping of ESTs.
    Funct Integr Genomics. 2003 Mar;3(1-2):39-55 PMID: 12590342
  18. Development of a chromosomal arm map for wheat based on RFLP markers.
    Theor Appl Genet. 1992 May;83(8):1035-43 PMID: 24202932
  19. Microcolinearity between a 2-cM region encompassing the grain protein content locus Gpc-6B1 on wheat chromosome 6B and a 350-kb region on rice chromosome 2.
    Funct Integr Genomics. 2004 Mar;4(1):59-66 PMID: 14752608
  20. Genetic analysis of durable resistance to yellow rust in bread wheat.
    Theor Appl Genet. 2005 May;110(8):1401-9 PMID: 15841362
Article Info
Journal
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik
Abbr.
Theor Appl Genet
ISSN
0040-5752
Published
2008-09-00
Epub
2008-00-27
Pages
793-802
Language
English
Region
Germany
NLM ID
0145600
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]