Home LiteratureArticle Details
PMID: 18667155 Published · ppublish English Comparative Study Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Posttranscriptional regulation of BK channel splice variant stability by miR-9 underlies neuroadaptation to alcohol.

Neuron ·Vol. 59 ·No. 2 ·2008-07-31 ·Pages 274-87

Pietrzykowski AZ, Friesen RM, Martin GE, Puig SI, Nowak CL, Wynne PM, Siegelmann HT, Treistman SN

Abstract

Tolerance represents a critical component of addiction. The large-conductance calcium- and voltage-activated potassium channel (BK) is a well-established alcohol target, and an important element in behavioral and molecular alcohol tolerance. We tested whether microRNA, a newly discovered class of gene expression regulators, plays a role in the development of tolerance. We show that in adult mammalian brain, alcohol upregulates microRNA miR-9 and mediates posttranscriptional reorganization in BK mRNA splice variants by miR-9-dependent destabilization of BK mRNAs containing 3'UTRs with a miR-9 Recognition Element (MRE). Different splice variants encode BK isoforms with different alcohol sensitivities. Computational modeling indicates that this miR-9-dependent mechanism contributes to alcohol tolerance. Moreover, this mechanism can be extended to include regulation of additional miR-9 targets relevant to alcohol abuse. Our results describe a mechanism of multiplex regulation of stability of alternatively spliced mRNA by microRNA in drug adaptation and neuronal plasticity.

MeSH Terms
Adaptation, Physiological/drug effects,genetics Animals Animals, Newborn Cell Line Cells, Cultured Ethanol/pharmacology Humans Large-Conductance Calcium-Activated Potassium Channels/genetics,metabolism MicroRNAs/genetics,metabolism Neurons/drug effects,physiology Protein Processing, Post-Translational/drug effects,physiology RNA Splicing/physiology RNA Stability/physiology Rats Rats, Sprague-Dawley
Chemicals
Large-Conductance Calcium-Activated Potassium Channels MicroRNAs Ethanol
Authors & Affiliations
8 authors, click to expand affiliations / ORCID
Pietrzykowski Andrzej Z
Department of Psychiatry, Brudnick Neuropsychiatric Research Institute, University of Massachusetts Medical School, 303 Belmont Street, Worcester, MA 01604, USA.
Friesen Ryan M
Martin Gilles E
Puig Sylvie I
Nowak Cheryl L
Wynne Patricia M
Siegelmann Hava T
Treistman Steven N
References (81)
81 references, click to expand
  1. Distribution of high-conductance Ca(2+)-activated K+ channels in rat brain: targeting to axons and nerve terminals.
    J Neurosci. 1996 Feb 1;16(3):955-63 PMID: 8558264
  2. MicroRNA targeting specificity in mammals: determinants beyond seed pairing.
    Mol Cell. 2007 Jul 6;27(1):91-105 PMID: 17612493
  3. Alternative splicing of potassium channels: a dynamic switch of cellular excitability.
    Trends Cell Biol. 2001 Sep;11(9):353-8 PMID: 11514177
  4. Specificity of microRNA target selection in translational repression.
    Genes Dev. 2004 Mar 1;18(5):504-11 PMID: 15014042
  5. Cloning, expression, and distribution of functionally distinct Ca(2+)-activated K+ channel isoforms from human brain.
    Neuron. 1994 Dec;13(6):1315-30 PMID: 7993625
  6. Alcohol tolerance in large-conductance, calcium-activated potassium channels of CNS terminals is intrinsic and includes two components: decreased ethanol potentiation and decreased channel density.
    J Neurosci. 2004 Sep 22;24(38):8322-32 PMID: 15385615
  7. Control of alternative splicing of potassium channels by stress hormones.
    Science. 1998 Apr 17;280(5362):443-6 PMID: 9545224
  8. Distinct stoichiometry of BKCa channel tetramer phosphorylation specifies channel activation and inhibition by cAMP-dependent protein kinase.
    Proc Natl Acad Sci U S A. 2004 Aug 10;101(32):11897-902 PMID: 15280542
  9. Alternative RNA splicing in the nervous system.
    Prog Neurobiol. 2001 Oct;65(3):289-308 PMID: 11473790
  10. Ethanol sensitivity of BK(Ca) channels from arterial smooth muscle does not require the presence of the beta 1-subunit.
    Am J Physiol Cell Physiol. 2003 Jun;284(6):C1468-80 PMID: 12570985
  11. Potent inhibition of the aortic smooth muscle maxi-K channel by clinical doses of ethanol.
    Am J Physiol Cell Physiol. 2000 Oct;279(4):C1107-15 PMID: 11003591
  12. Diversity of Ca2+-activated K+ channel transcripts in inner ear hair cells.
    Gene. 2007 Jan 15;386(1-2):11-23 PMID: 17097837
  13. Cholesterol antagonizes ethanol potentiation of human brain BKCa channels reconstituted into phospholipid bilayers.
    Mol Pharmacol. 2003 Aug;64(2):365-72 PMID: 12869641
  14. Differential distribution of Ca2+-activated K+ channel splice variants among hair cells along the tonotopic axis of the chick cochlea.
    Neuron. 1997 Nov;19(5):1077-85 PMID: 9390520
  15. Increased large conductance calcium-activated potassium (BK) channel expression accompanied by STREX variant downregulation in the developing mouse CNS.
    BMC Dev Biol. 2006 Jul 27;6:37 PMID: 16872513
  16. Role for a bidentate ribonuclease in the initiation step of RNA interference.
    Nature. 2001 Jan 18;409(6818):363-6 PMID: 11201747
  17. High-conductance potassium channels of the SLO family.
    Nat Rev Neurosci. 2006 Dec;7(12):921-31 PMID: 17115074
  18. MicroRNAs regulate the expression of the alternative splicing factor nPTB during muscle development.
    Genes Dev. 2007 Jan 1;21(1):71-84 PMID: 17210790
  19. Accurate quantitative RT-PCR for relative expression of Slo splice variants.
    J Neurosci Methods. 2002 Apr 15;115(2):189-98 PMID: 11992670
  20. Intracellular modulation of NMDA receptor function by antipsychotic drugs.
    J Neurosci. 2000 Jun 1;20(11):4011-20 PMID: 10818136
  21. Tolerance to acute ethanol inhibition of peptide hormone release in the isolated neurohypophysis.
    Alcohol Clin Exp Res. 2000 Jul;24(7):1077-83 PMID: 10924013
  22. Immunolocalization of the Ca2+-activated K+ channel Slo1 in axons and nerve terminals of mammalian brain and cultured neurons.
    J Comp Neurol. 2006 May 20;496(3):289-302 PMID: 16566008
  23. Alternative splicing: new insights from global analyses.
    Cell. 2006 Jul 14;126(1):37-47 PMID: 16839875
  24. A combined computational-experimental approach predicts human microRNA targets.
    Genes Dev. 2004 May 15;18(10):1165-78 PMID: 15131085
  25. Potassium currents in hippocampal pyramidal cells.
    Prog Brain Res. 1990;83:161-87 PMID: 2203097
  26. Regulation of the gating of BKCa channel by lipid bilayer thickness.
    J Biol Chem. 2007 Mar 9;282(10):7276-86 PMID: 17209047
  27. The splice of life: alternative splicing and neurological disease.
    Nat Rev Neurosci. 2001 Jan;2(1):43-50 PMID: 11253358
  28. Mechanisms of alternative pre-messenger RNA splicing.
    Annu Rev Biochem. 2003;72:291-336 PMID: 12626338
  29. A central role of the BK potassium channel in behavioral responses to ethanol in C. elegans.
    Cell. 2003 Dec 12;115(6):655-66 PMID: 14675531
  30. Alcohol modulation of calcium-activated potassium channels.
    Neurochem Int. 1999 Aug;35(2):103-6 PMID: 10405993
  31. Splicing regulation in neurologic disease.
    Neuron. 2006 Oct 5;52(1):93-101 PMID: 17015229
  32. Functional differences among alternatively spliced variants of Slowpoke, a Drosophila calcium-activated potassium channel.
    J Biol Chem. 1994 Aug 12;269(32):20347-51 PMID: 8051129
  33. MicroRNA-directed cleavage of HOXB8 mRNA.
    Science. 2004 Apr 23;304(5670):594-6 PMID: 15105502
  34. The highways and byways of mRNA decay.
    Nat Rev Mol Cell Biol. 2007 Feb;8(2):113-26 PMID: 17245413
  35. Neural mechanisms of addiction: the role of reward-related learning and memory.
    Annu Rev Neurosci. 2006;29:565-98 PMID: 16776597
  36. The Drosophila SDE3 homolog armitage is required for oskar mRNA silencing and embryonic axis specification.
    Cell. 2004 Mar 19;116(6):817-29 PMID: 15035984
  37. Distribution of Ca2+-activated K+ channel isoforms along the tonotopic gradient of the chicken's cochlea.
    Neuron. 1997 Nov;19(5):1061-75 PMID: 9390519
  38. Protein diversity from alternative splicing: a challenge for bioinformatics and post-genome biology.
    Cell. 2000 Oct 27;103(3):367-70 PMID: 11081623
  39. Ethanol potentiation of calcium-activated potassium channels reconstituted into planar lipid bilayers.
    Mol Pharmacol. 1998 Aug;54(2):397-406 PMID: 9687582
  40. The neuronal microRNA system.
    Nat Rev Neurosci. 2006 Dec;7(12):911-20 PMID: 17115073
  41. mSlo, a complex mouse gene encoding "maxi" calcium-activated potassium channels.
    Science. 1993 Jul 9;261(5118):221-4 PMID: 7687074
  42. Low level of response to alcohol as a predictor of future alcoholism.
    Am J Psychiatry. 1994 Feb;151(2):184-9 PMID: 8296886
  43. Control of translation and mRNA degradation by miRNAs and siRNAs.
    Genes Dev. 2006 Mar 1;20(5):515-24 PMID: 16510870
  44. Differential repression of alternative transcripts: a screen for miRNA targets.
    PLoS Comput Biol. 2006 May;2(5):e43 PMID: 16699595
  45. Molecular diversity of K+ channels.
    Ann N Y Acad Sci. 1999 Apr 30;868:233-85 PMID: 10414301
  46. Ethanol activates maxi Ca2+-activated K+ channels of clonal pituitary (GH3) cells.
    J Membr Biol. 1997 Jun 1;157(3):237-45 PMID: 9178611
  47. Environmental epigenomics and disease susceptibility.
    Nat Rev Genet. 2007 Apr;8(4):253-62 PMID: 17363974
  48. A microRNA array reveals extensive regulation of microRNAs during brain development.
    RNA. 2003 Oct;9(10):1274-81 PMID: 13130141
  49. The role of the striatopallidal and extended amygdala systems in drug addiction.
    Ann N Y Acad Sci. 1999 Jun 29;877:445-60 PMID: 10415664
  50. RISC assembly defects in the Drosophila RNAi mutant armitage.
    Cell. 2004 Mar 19;116(6):831-41 PMID: 15035985
  51. Alternative splicing switches potassium channel sensitivity to protein phosphorylation.
    J Biol Chem. 2001 Mar 16;276(11):7717-20 PMID: 11244090
  52. Subordination stress alters alternative splicing of the Slo gene in tree shrew adrenals.
    Horm Behav. 2003 Jan;43(1):180-6 PMID: 12614648
  53. MicroRNAs: small RNAs with a big role in gene regulation.
    Nat Rev Genet. 2004 Jul;5(7):522-31 PMID: 15211354
  54. Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?
    Nat Rev Genet. 2008 Feb;9(2):102-14 PMID: 18197166
  55. Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets.
    Cell. 2005 Jan 14;120(1):15-20 PMID: 15652477
  56. The functions of animal microRNAs.
    Nature. 2004 Sep 16;431(7006):350-5 PMID: 15372042
  57. Prediction of mammalian microRNA targets.
    Cell. 2003 Dec 26;115(7):787-98 PMID: 14697198
  58. Switching from repression to activation: microRNAs can up-regulate translation.
    Science. 2007 Dec 21;318(5858):1931-4 PMID: 18048652
  59. Alternative splicing of Slo channel gene programmed by estrogen, progesterone and pregnancy.
    FEBS Lett. 2005 Aug 29;579(21):4856-60 PMID: 16102753
  60. Ensembl 2007.
    Nucleic Acids Res. 2007 Jan;35(Database issue):D610-7 PMID: 17148474
  61. Calcium-activated potassium channels expressed from cloned complementary DNAs.
    Neuron. 1992 Aug;9(2):209-16 PMID: 1497890
  62. Identification of a novel tetramerization domain in large conductance K(ca) channels.
    Neuron. 2001 Oct 11;32(1):13-23 PMID: 11604135
  63. MicroRNAs direct rapid deadenylation of mRNA.
    Proc Natl Acad Sci U S A. 2006 Mar 14;103(11):4034-9 PMID: 16495412
  64. RNAhybrid: microRNA target prediction easy, fast and flexible.
    Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W451-4 PMID: 16845047
  65. Target protectors reveal dampening and balancing of Nodal agonist and antagonist by miR-430.
    Science. 2007 Oct 12;318(5848):271-4 PMID: 17761850
  66. Drug-induced epigenetic changes produce drug tolerance.
    PLoS Biol. 2007 Oct 16;5(10):e265 PMID: 17941717
  67. The slowpoke gene is necessary for rapid ethanol tolerance in Drosophila.
    Alcohol Clin Exp Res. 2005 Oct;29(10):1777-86 PMID: 16269907
  68. Alternative pre-mRNA splicing: the logic of combinatorial control.
    Trends Biochem Sci. 2000 Aug;25(8):381-8 PMID: 10916158
  69. Cerebellar ataxia and Purkinje cell dysfunction caused by Ca2+-activated K+ channel deficiency.
    Proc Natl Acad Sci U S A. 2004 Jun 22;101(25):9474-8 PMID: 15194823
  70. Integrated channel plasticity contributes to alcohol tolerance in neurohypophysial terminals.
    Mol Pharmacol. 2002 Jul;62(1):135-42 PMID: 12065764
  71. MicroRNAs: genomics, biogenesis, mechanism, and function.
    Cell. 2004 Jan 23;116(2):281-97 PMID: 14744438
  72. Regulation of mRNA stability in mammalian cells.
    Gene. 2001 Mar 7;265(1-2):11-23 PMID: 11255003
  73. High-conductance calcium-activated potassium channels in rat brain: pharmacology, distribution, and subunit composition.
    Biochemistry. 1999 Apr 27;38(17):5392-400 PMID: 10220326
  74. Ethanol increases the activity of Ca(++)-dependent K+ (mslo) channels: functional interaction with cytosolic Ca++.
    J Pharmacol Exp Ther. 1998 Jan;284(1):258-68 PMID: 9435186
  75. Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems.
    J Mol Endocrinol. 2002 Aug;29(1):23-39 PMID: 12200227
  76. The widespread impact of mammalian MicroRNAs on mRNA repression and evolution.
    Science. 2005 Dec 16;310(5755):1817-21 PMID: 16308420
  77. Somatic localization of a specific large-conductance calcium-activated potassium channel subtype controls compartmentalized ethanol sensitivity in the nucleus accumbens.
    J Neurosci. 2004 Jul 21;24(29):6563-72 PMID: 15269268
  78. Functional characteristics of two BKCa channel variants differentially expressed in rat brain tissues.
    Eur J Biochem. 2000 Feb;267(3):910-8 PMID: 10651830
  79. A component of calcium-activated potassium channels encoded by the Drosophila slo locus.
    Science. 1991 Aug 2;253(5019):551-5 PMID: 1857984
  80. A microRNA in a multiple-turnover RNAi enzyme complex.
    Science. 2002 Sep 20;297(5589):2056-60 PMID: 12154197
  81. Regulation of gene expression by alternative untranslated regions.
    Trends Genet. 2006 Mar;22(3):119-22 PMID: 16430990
Article Info
Journal
Neuron
Abbr.
Neuron
ISSN
1097-4199
Published
2008-07-31
Pages
274-87
Language
English
Region
United States
NLM ID
8809320
PMCID
PMC2714263
Subset
IM
Grants
NIAAA NIH HHS · R01 AA018038-02 · United States
NIAAA NIH HHS · R01 AA018038 · United States
NIAAA NIH HHS · AA08003 · United States
NIAAA NIH HHS · R01 AA008003-21 · United States
NIAAA NIH HHS · R01 AA008003 · United States
Corrections
CommentIn
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]