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PMID: 18836165 Published · ppublish English

Absence of association between COL1A1 polymorphisms and high myopia in the Japanese population.

Investigative ophthalmology & visual science ·Vol. 50 ·No. 2 ·2009-02-06

Nakanishi Hideo, Yamada Ryo, Gotoh Norimoto, Hayashi Hisako, Otani Atsushi, Tsujikawa Akitaka, Yamashiro Kenji, Shimada Noriaki, Ohno-Matsui Kyoko, Mochizuki Manabu, Saito Masaaki, Saito Kuniharu, Iida Tomohiro, Matsuda Fumihiko, Yoshimura Nagahisa

Abstract

The collagen type I alpha 1 (COL1A1) gene was recently reported to be associated with high myopia in the Japanese population. To validate this positive association, the tag single-nucleotide polymorphism (tSNP) approach was used.,Eight tSNPs, including rs2075555 and rs2269336 (previously reported to be high myopia-susceptible SNPs in the Japanese), were selected to tag the linkage disequilibrium blocks harboring the COL1A1. These tSNPs were genotyped by using an SNP assay. A total of 427 unrelated Japanese cases with high myopia (axial length, >or=26.50 mm in both eyes; the refraction of the 644 phakic eyes ranged from -5.0 to -36.0 D, with a mean +/- SD of -13.61+/-4.20 D) and 420 Japanese control subjects were recruited. Genotype and allele distributions were compared between the cases and controls by using the chi(2) test, with multiple testing corrections performed by the permutation test.,There was no association noted between high myopia and rs2075555 (P=0.47, P(c)>0.99) and rs2269336 (P=0.40, P(c)>0.99). Meta-analysis of a previous Japanese study and new data obtained in a fixed-effect model indicated a mild significant association of high myopia with rs2075555 (odds ratio [OR], 1.19; 95% confidence interval [CI], 1.03-1.38, P=0.022) and rs2269336 (OR, 1.18; 95% CI, 1.02-1.36, P=0.026). No significant associations were seen with further tSNPs tests.,This study did not replicate the previously reported positive association between COL1A1 and high myopia in the Japanese population, and thus the genetic risk associated with this gene, if any, is weaker than originally reported.

Article Info
Journal
Investigative ophthalmology & visual science
Abbr.
Invest Ophthalmol Vis Sci
Published
2009-02-06
Indexed
2009-01-27
Updated
2009-01-27
Language
English
Country/Region
United States
NLM ID
7703701
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