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PMID: 18957448 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

The GOA database in 2009--an integrated Gene Ontology Annotation resource.

Nucleic acids research ·Vol. 37 ·No. Database issue ·2009-01-00 ·Pages D396-403

Barrell D, Dimmer E, Huntley RP, Binns D, O'Donovan C, Apweiler R

Abstract

The Gene Ontology Annotation (GOA) project at the EBI (http://www.ebi.ac.uk/goa) provides high-quality electronic and manual associations (annotations) of Gene Ontology (GO) terms to UniProt Knowledgebase (UniProtKB) entries. Annotations created by the project are collated with annotations from external databases to provide an extensive, publicly available GO annotation resource. Currently covering over 160 000 taxa, with greater than 32 million annotations, GOA remains the largest and most comprehensive open-source contributor to the GO Consortium (GOC) project. Over the last five years, the group has augmented the number and coverage of their electronic pipelines and a number of new manual annotation projects and collaborations now further enhance this resource. A range of files facilitate the download of annotations for particular species, and GO term information and associated annotations can also be viewed and downloaded from the newly developed GOA QuickGO tool (http://www.ebi.ac.uk/QuickGO), which allows users to precisely tailor their annotation set.

MeSH Terms
Animals Databases, Protein Genes Humans Proteins/genetics Proteome/genetics Vocabulary, Controlled
Chemicals
Proteins Proteome
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Barrell Daniel
Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK. [email protected]
Dimmer Emily
Huntley Rachael P
Binns David
O'Donovan Claire
Apweiler Rolf
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12 references, click to expand
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Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
1362-4962
Published
2009-01-00
Epub
2008-00-27
Pages
D396-403
Language
English
Region
England
NLM ID
0411011
PMCID
PMC2686469
Subset
IM
Grants
Biotechnology and Biological Sciences Research Council · BB/E023541/1 · United Kingdom
NHGRI NIH HHS · HG002273 · United States
NHGRI NIH HHS · R01HG02273-02 · United States
British Heart Foundation · SP:07/007/23671 · United Kingdom
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