Home LiteratureArticle Details
PMID: 1904859 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Molecular cloning and characterization of two genes encoding sigma factors that direct transcription from a Bacillus thuringiensis crystal protein gene promoter.

Journal of bacteriology ·Vol. 173 ·No. 12 ·1991-06-00 ·Pages 3846-54

Adams LF, Brown KL, Whiteley HR

Abstract

Two sigma factors, sigma 35 and sigma 28, direct transcription from the Bt I and Bt II promoters of the cryIA(a) gene of Bacillus thuringiensis; this gene encodes a lepidopteran-specific crystal protoxin. These sigma factors were biochemically characterized in previous work (K. L. Brown and H. R. Whiteley, Proc. Natl. Acad. Sci. USA 85:4166-4170, 1988; K. L. Brown and H. R. Whiteley, J. Bacteriol. 172:6682-6688, 1990). In this paper, we describe the cloning of the genes encoding these two sigma factors, as well as their nucleotide and deduced amino acid sequences. The deduced amino acid sequences of the sigma 35 and sigma 28 genes show 88 and 85% identity, respectively, to the sporulation-specific sigma E and sigma K polypeptides of Bacillus subtilis. Transformation of the sigma 35 and sigma 28 genes into B. subtilis shows that the respective B. thuringiensis sigma factor genes can complement spoIIG55 (sigma E) and spoIIIC94 (sigma K) defects. Further, B. thuringiensis core polymerase reconstituted with either the sigma 35 or sigma 28 polypeptide directs transcription from B. subtilis promoters recognized by B. subtilis RNA polymerase containing sigma E and sigma K, respectively. Thus, sigma 35 and sigma 28 of B. thuringiensis appear to be functionally equivalent to sigma E and sigma K of B. subtilis. However, unlike the situation for sigma K in B. subtilis, the homologous sigma 28 gene in B. thuringiensis does not result from a late-sporulation-phase chromosomal rearrangement of two separate, partial genes.

Related Genes
MeSH Terms
Amino Acid Sequence Bacillus subtilis/genetics Bacillus thuringiensis/genetics Bacillus thuringiensis Toxins Bacterial Proteins/genetics Bacterial Toxins Base Sequence Chromosomes, Bacterial Cloning, Molecular Endotoxins Genes, Bacterial Hemolysin Proteins Molecular Sequence Data Nucleic Acid Hybridization Plasmids Polymerase Chain Reaction Promoter Regions, Genetic Restriction Mapping Sequence Homology, Nucleic Acid Sigma Factor/genetics Transcription, Genetic
Chemicals
Bacillus thuringiensis Toxins Bacterial Proteins Bacterial Toxins Endotoxins Hemolysin Proteins Sigma Factor insecticidal crystal protein, Bacillus Thuringiensis
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Adams L F
Department of Microbiology, University of Washington, Seattle 98195.
Brown K L
Whiteley H R
References (50)
50 references, click to expand
  1. Isolation of the second Bacillus thuringiensis RNA polymerase that transcribes from a crystal protein gene promoter.
    J Bacteriol. 1990 Dec;172(12):6682-8 PMID: 1701426
  2. Base pairing involving deoxyinosine: implications for probe design.
    Nucleic Acids Res. 1985 Dec 20;13(24):8927-38 PMID: 4080553
  3. Switch protein alters specificity of RNA polymerase containing a compartment-specific sigma factor.
    Science. 1989 Jan 27;243(4890):526-9 PMID: 2492118
  4. Chromosomal rearrangement generating a composite gene for a developmental transcription factor.
    Science. 1989 Jan 27;243(4890):507-12 PMID: 2536191
  5. Isolation of a Bacillus thuringiensis RNA polymerase capable of transcribing crystal protein genes.
    Proc Natl Acad Sci U S A. 1988 Jun;85(12):4166-70 PMID: 3380786
  6. Identification of a new sigma-factor involved in compartmentalized gene expression during sporulation of Bacillus subtilis.
    Genes Dev. 1989 Feb;3(2):141-9 PMID: 2497051
  7. New RNA polymerase sigma factor under spo0 control in Bacillus subtilis.
    Proc Natl Acad Sci U S A. 1986 Dec;83(24):9438-42 PMID: 3099284
  8. Interactions of Bacillus subtilis RNA polymerase with subunits determining the specificity of initiation. Sigma and delta peptides can bind simultaneously to core.
    J Biol Chem. 1986 Dec 15;261(35):16565-70 PMID: 3097010
  9. Analysis of the regulatory sequences needed for induction of the chloramphenicol acetyltransferase gene cat-86 by chloramphenicol and amicetin.
    J Bacteriol. 1986 Sep;167(3):842-9 PMID: 3462183
  10. Synthesis of sigma 29, an RNA polymerase specificity determinant, is a developmentally regulated event in Bacillus subtilis.
    J Bacteriol. 1985 Jan;161(1):340-6 PMID: 3918005
  11. Tandem genes encoding sigma-factors for consecutive steps of development in Bacillus subtilis.
    Genes Dev. 1989 Feb;3(2):150-7 PMID: 2497052
  12. The promoter for a sporulation gene in the spoIVC locus of Bacillus subtilis and its use in studies of temporal and spatial control of gene expression.
    J Bacteriol. 1988 Aug;170(8):3513-22 PMID: 2841290
  13. Bacillus thuringiensis var. israelensis delta-endotoxin. Nucleotide sequence and characterization of the transcripts in Bacillus thuringiensis and Escherichia coli.
    J Mol Biol. 1986 Sep 5;191(1):1-11 PMID: 3025452
  14. Rapid and sensitive protein similarity searches.
    Science. 1985 Mar 22;227(4693):1435-41 PMID: 2983426
  15. Transcriptional regulation and structure of the Bacillus subtilis sporulation locus spoIIIC.
    J Bacteriol. 1988 Mar;170(3):1162-7 PMID: 3125151
  16. Processing of a sporulation sigma factor in Bacillus subtilis: how morphological structure could control gene expression.
    Cell. 1988 Mar 11;52(5):697-704 PMID: 3125985
  17. Identification of the promoter for a spore coat protein gene in Bacillus subtilis and studies on the regulation of its induction at a late stage of sporulation.
    J Mol Biol. 1988 Apr 5;200(3):461-73 PMID: 3135411
  18. Sporulation-specific sigma factor sigma 29 of Bacillus subtilis is synthesized from a precursor protein, P31.
    Proc Natl Acad Sci U S A. 1987 Apr;84(7):1784-8 PMID: 3104904
  19. Regulatory studies on the promoter for a gene governing synthesis and assembly of the spore coat in Bacillus subtilis.
    J Mol Biol. 1989 May 20;207(2):393-404 PMID: 2474075
  20. Two developmental genes encoding sigma factor homologs are arranged in tandem in Bacillus subtilis.
    Proc Natl Acad Sci U S A. 1988 Oct;85(20):7637-41 PMID: 2459711
  21. The Bacillus subtilis spoIIG operon encodes both sigma E and a gene necessary for sigma E activation.
    J Bacteriol. 1988 Feb;170(2):507-11 PMID: 2448286
  22. Transcriptional control of the Bacillus subtilis spoIID gene.
    J Bacteriol. 1986 Mar;165(3):771-9 PMID: 2419309
  23. The amino acid sequence of a crystal protein from Bacillus thuringiensis deduced from the DNA base sequence.
    J Biol Chem. 1985 May 25;260(10):6264-72 PMID: 2581950
  24. Gene structure and precursor processing of a novel Bacillus subtilis spore coat protein.
    Mol Microbiol. 1989 Mar;3(3):437-44 PMID: 2546006
  25. Temporal and spatial control of the mother-cell regulatory gene spoIIID of Bacillus subtilis.
    Genes Dev. 1989 Nov;3(11):1735-44 PMID: 2514119
  26. Elution of proteins from sodium dodecyl sulfate-polyacrylamide gels, removal of sodium dodecyl sulfate, and renaturation of enzymatic activity: results with sigma subunit of Escherichia coli RNA polymerase, wheat germ DNA topoisomerase, and other enzymes.
    Anal Biochem. 1980 Nov 15;109(1):76-86 PMID: 6258458
  27. Molecular cloning and the nucleotide sequence of the Mr 28 000 crystal protein gene of Bacillus thuringiensis subsp. israelensis.
    Nucleic Acids Res. 1985 Nov 25;13(22):8207-17 PMID: 4070003
  28. The Bacillus subtilis gene for the development transcription factor sigma K is generated by excision of a dispensable DNA element containing a sporulation recombinase gene.
    Genes Dev. 1990 Apr;4(4):525-35 PMID: 2163341
  29. Cascade regulation of spore coat gene expression in Bacillus subtilis.
    J Mol Biol. 1990 Apr 20;212(4):645-60 PMID: 1691789
  30. Rapid and sensitive sequence comparison with FASTP and FASTA.
    Methods Enzymol. 1990;183:63-98 PMID: 2156132
  31. A forespore checkpoint for mother cell gene expression during development in B. subtilis.
    Cell. 1990 Jul 27;62(2):239-50 PMID: 2115401
  32. The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers.
    Gene. 1982 Oct;19(3):259-68 PMID: 6295879
  33. Two RNA polymerase sigma factors from Bacillus subtilis discriminate between overlapping promoters for a developmentally regulated gene.
    Nature. 1983 Apr 28;302(5911):800-4 PMID: 6405278
  34. Promoter for a developmentally regulated gene in Bacillus subtilis.
    Cell. 1981 Sep;25(3):783-91 PMID: 6269757
  35. Transcriptional and translational start sites for the Bacillus thuringiensis crystal protein gene.
    J Biol Chem. 1983 Feb 10;258(3):1960-7 PMID: 6296116
  36. Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing.
    Gene. 1984 Jun;28(3):351-9 PMID: 6235151
  37. Cloning and expression of the Bacillus thuringiensis crystal protein gene in Escherichia coli.
    Proc Natl Acad Sci U S A. 1981 May;78(5):2893-7 PMID: 7019914
  38. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  39. Fate of transforming DNA following uptake by competent Bacillus subtilis. I. Formation and properties of the donor-recipient complex.
    J Mol Biol. 1971 Mar 14;56(2):209-21 PMID: 4994568
  40. Biogenesis of the crystalline inclusion of Bacillus thuringiensis during sporulation.
    Eur J Biochem. 1971 Nov 11;23(2):282-94 PMID: 5003206
  41. Formation of the parasporal inclusion of Bacillus thuringiensis.
    Eur J Biochem. 1971 Jan;18(2):226-37 PMID: 5541507
  42. Insecticidal crystal proteins of Bacillus thuringiensis.
    Microbiol Rev. 1989 Jun;53(2):242-55 PMID: 2666844
  43. Two highly related insecticidal crystal proteins of Bacillus thuringiensis subsp. kurstaki possess different host range specificities.
    J Bacteriol. 1989 Feb;171(2):965-74 PMID: 2914879
  44. Speeding-up the sequencing of double-stranded DNA.
    Nucleic Acids Res. 1988 Jun 10;16(11):5198 PMID: 3387227
  45. Nucleotide sequence of an additional crystal protein gene cloned from Bacillus thuringiensis subsp. thuringiensis.
    Nucleic Acids Res. 1988 Mar 25;16(6):2723-4 PMID: 3362680
  46. A developmental gene product of Bacillus subtilis homologous to the sigma factor of Escherichia coli.
    Nature. 1984 Nov 22-28;312(5992):376-8 PMID: 6438529
  47. Production of single-stranded plasmid DNA.
    Methods Enzymol. 1987;153:3-11 PMID: 3323803
  48. The molecular biology of parasporal crystal body formation in Bacillus thuringiensis.
    Annu Rev Microbiol. 1986;40:549-76 PMID: 3535652
  49. Sequence from picomole quantities of proteins electroblotted onto polyvinylidene difluoride membranes.
    J Biol Chem. 1987 Jul 25;262(21):10035-8 PMID: 3611052
  50. Bacillus thuringiensis and related insect pathogens.
    Microbiol Rev. 1986 Mar;50(1):1-24 PMID: 3007957
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
1991-06-00
Pages
3846-54
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC208016
Subset
IM
Grants
NIGMS NIH HHS · GM-11715 · United States
NIGMS NIH HHS · K6-GM-442 · United States
NIGMS NIH HHS · T32-GM-07270 · United States
Databases
GENBANK
M61752, M62938, M62939, M62940, M62941, M62942, M62943, M62944, M62945, X56696, X56697
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]