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PMID: 19430453 Published · ppublish English Journal Article

How to map billions of short reads onto genomes.

Nature biotechnology ·Vol. 27 ·No. 5 ·2009-05-00 ·Pages 455-7

Trapnell C, Salzberg SL

Abstract

Mapping the vast quantities of short sequence fragments produced by next-generation sequencing platforms is a challenge. What programs are available and how do they work?

MeSH Terms
Algorithms Base Sequence Genome Sequence Alignment/methods Sequence Analysis, DNA Software
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Trapnell Cole
Center for Bioinformatics and Computational Biology, University of Maryland, College Park, Maryland, USA. [email protected]
Salzberg Steven L
References (10)
10 references, click to expand
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Article Info
Journal
Nature biotechnology
Abbr.
Nat Biotechnol
ISSN
1546-1696
DOI
10.1038/nbt0509-455
Email
[email protected]
Published
2009-05-00
Pages
455-7
Language
English
Region
United States
NLM ID
9604648
PMCID
PMC2836519
Subset
IM
Grants
NIGMS NIH HHS · R01 GM083873 · United States
NLM NIH HHS · R01 LM006845-10 · United States
NIGMS NIH HHS · R01 GM083873-06 · United States
NLM NIH HHS · R01 LM006845-09 · United States
NLM NIH HHS · R01 LM006845 · United States
External Links
PubMed source DOI: 10.1038/nbt0509-455 PMC Full Text View journal details
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