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PMID: 19503089 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Mutation in TACO1, encoding a translational activator of COX I, results in cytochrome c oxidase deficiency and late-onset Leigh syndrome.

Nature genetics ·Vol. 41 ·No. 7 ·2009-07-00 ·Pages 833-7

Weraarpachai W, Antonicka H, Sasarman F, Seeger J, Schrank B, Kolesar JE, Lochmüller H, Chevrette M, Kaufman BA, Horvath R, Shoubridge EA

Abstract

Defects in mitochondrial translation are among the most common causes of mitochondrial disease, but the mechanisms that regulate mitochondrial translation remain largely unknown. In the yeast Saccharomyces cerevisiae, all mitochondrial mRNAs require specific translational activators, which recognize sequences in 5' UTRs and mediate translation. As mammalian mitochondrial mRNAs do not have significant 5' UTRs, alternate mechanisms must exist to promote translation. We identified a specific defect in the synthesis of the mitochondrial DNA (mtDNA)-encoded COX I subunit in a pedigree segregating late-onset Leigh syndrome and cytochrome c oxidase (COX) deficiency. We mapped the defect to chromosome 17q by functional complementation and identified a homozygous single-base-pair insertion in CCDC44, encoding a member of a large family of hypothetical proteins containing a conserved DUF28 domain. CCDC44, renamed TACO1 for translational activator of COX I, shares a notable degree of structural similarity with bacterial homologs, and our findings suggest that it is one of a family of specific mammalian mitochondrial translational activators.

MeSH Terms
Chromosomes, Human, Pair 17 Cytochrome-c Oxidase Deficiency/genetics Electron Transport Complex IV/genetics,metabolism Genome-Wide Association Study Humans Leigh Disease/genetics Microfilament Proteins/genetics Microsatellite Repeats Mutation
Chemicals
Microfilament Proteins coronin proteins Electron Transport Complex IV
Authors & Affiliations
11 authors, click to expand affiliations / ORCID
Weraarpachai Woranontee
Department of Human Genetics, McGill University, Montreal, Quebec, Canada.
Antonicka Hana
Sasarman Florin
Seeger Jürgen
Schrank Bertold
Kolesar Jill E
Lochmüller Hanns
Chevrette Mario
Kaufman Brett A
Horvath Rita
Shoubridge Eric A
References (28)
28 references, click to expand
  1. SURF1, encoding a factor involved in the biogenesis of cytochrome c oxidase, is mutated in Leigh syndrome.
    Nat Genet. 1998 Dec;20(4):337-43 PMID: 9843204
  2. Template-based modeling and free modeling by I-TASSER in CASP7.
    Proteins. 2007;69 Suppl 8:108-17 PMID: 17894355
  3. Construction and characterization of a highly stable human: rodent monochromosomal hybrid panel for genetic complementation and genome mapping studies.
    Cytogenet Cell Genet. 1995;71(1):68-76 PMID: 7606932
  4. Exploring the functional landscape of gene expression: directed search of large microarray compendia.
    Bioinformatics. 2007 Oct 15;23(20):2692-9 PMID: 17724061
  5. Identification of a gene causing human cytochrome c oxidase deficiency by integrative genomics.
    Proc Natl Acad Sci U S A. 2003 Jan 21;100(2):605-10 PMID: 12529507
  6. A rapid assay for mitochondrial DNA damage and respiratory chain inhibition in the yeast Saccharomyces cerevisiae.
    Environ Mol Mutagen. 2001;38(2-3):153-8 PMID: 11746749
  7. Pentatricopeptide repeat (PPR) proteins as sequence-specificity factors in post-transcriptional processes in organelles.
    Biochem Soc Trans. 2007 Dec;35(Pt 6):1643-7 PMID: 18031283
  8. Shy1p is necessary for full expression of mitochondrial COX1 in the yeast model of Leigh's syndrome.
    EMBO J. 2002 Jan 15;21(1-2):43-52 PMID: 11782424
  9. The mitochondrial transcription factor TFAM coordinates the assembly of multiple DNA molecules into nucleoid-like structures.
    Mol Biol Cell. 2007 Sep;18(9):3225-36 PMID: 17581862
  10. Ab initio modeling of small proteins by iterative TASSER simulations.
    BMC Biol. 2007 May 08;5:17 PMID: 17488521
  11. Expression and functional analysis of SURF1 in Leigh syndrome patients with cytochrome c oxidase deficiency.
    Hum Mol Genet. 1999 Dec;8(13):2541-9 PMID: 10556303
  12. SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling.
    Electrophoresis. 1997 Dec;18(15):2714-23 PMID: 9504803
  13. Mutations in COX15 produce a defect in the mitochondrial heme biosynthetic pathway, causing early-onset fatal hypertrophic cardiomyopathy.
    Am J Hum Genet. 2003 Jan;72(1):101-14 PMID: 12474143
  14. The YebC family protein PA0964 negatively regulates the Pseudomonas aeruginosa quinolone signal system and pyocyanin production.
    J Bacteriol. 2008 Sep;190(18):6217-27 PMID: 18641136
  15. I-TASSER server for protein 3D structure prediction.
    BMC Bioinformatics. 2008 Jan 23;9:40 PMID: 18215316
  16. Expression of the E6 and E7 genes of human papillomavirus (HPV16) extends the life span of human myoblasts.
    Exp Cell Res. 1999 Apr 10;248(1):186-93 PMID: 10094825
  17. Distinctive features of the 5'-terminal sequences of the human mitochondrial mRNAs.
    Nature. 1981 Apr 9;290(5806):465-70 PMID: 7219535
  18. The role of the LRPPRC (leucine-rich pentatricopeptide repeat cassette) gene in cytochrome oxidase assembly: mutation causes lowered levels of COX (cytochrome c oxidase) I and COX III mRNA.
    Biochem J. 2004 Aug 15;382(Pt 1):331-6 PMID: 15139850
  19. Interactions among COX1, COX2, and COX3 mRNA-specific translational activator proteins on the inner surface of the mitochondrial inner membrane of Saccharomyces cerevisiae.
    Mol Biol Cell. 2003 Jan;14(1):324-33 PMID: 12529447
  20. Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis.
    Plant Cell. 2004 Aug;16(8):2089-103 PMID: 15269332
  21. Crystal structure of conserved hypothetical protein Aq1575 from Aquifex aeolicus.
    Proc Natl Acad Sci U S A. 2002 Jun 11;99(12):7980-5 PMID: 12060744
  22. Analysis of oxidative phosphorylation complexes in cultured human fibroblasts and amniocytes by blue-native-electrophoresis using mitoplasts isolated with the help of digitonin.
    Anal Biochem. 1995 Oct 10;231(1):218-24 PMID: 8678304
  23. Mutations in COX10 result in a defect in mitochondrial heme A biosynthesis and account for multiple, early-onset clinical phenotypes associated with isolated COX deficiency.
    Hum Mol Genet. 2003 Oct 15;12(20):2693-702 PMID: 12928484
  24. Mitochondrial DNA mutations in human disease.
    Nat Rev Genet. 2005 May;6(5):389-402 PMID: 15861210
  25. Chromosome 18 suppresses tumorigenic properties of human prostate cancer cells.
    Genes Chromosomes Cancer. 2006 Mar;45(3):220-30 PMID: 16281261
  26. Assembly of mitochondrial cytochrome c-oxidase, a complicated and highly regulated cellular process.
    Am J Physiol Cell Physiol. 2006 Dec;291(6):C1129-47 PMID: 16760263
  27. Mammalian cytochrome-c oxidase: characterization of enzyme and immunological detection of subunits in tissue extracts and whole cells.
    Methods Enzymol. 1995;260:117-32 PMID: 8592440
  28. Distribution and threshold expression of the tRNA(Lys) mutation in skeletal muscle of patients with myoclonic epilepsy and ragged-red fibers (MERRF).
    Am J Hum Genet. 1992 Dec;51(6):1187-200 PMID: 1334369
Article Info
Journal
Nature genetics
Abbr.
Nat Genet
ISSN
1546-1718
Published
2009-07-00
Epub
2009-00-07
Pages
833-7
Language
English
Region
United States
NLM ID
9216904
Subset
IM
Databases
RefSeq
NP_057444
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