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PMID: 19543200 Published · epublish English Journal Article Research Support, Non-U.S. Gov't Video-Audio Media

Large volume (20L+) filtration of coastal seawater samples.

Walsh DA, Zaikova E, Hallam SJ

Abstract

The workflow begins with the collection of coastal marine waters for downstream microbial community, nutrient and trace gas analyses. For this method, samples were collected from the deck of the HMS John Strickland operating in Saanich Inlet. This video documents large volume (> or = 20 L) filtration of microbial biomass, ranging between 0.22 microm and 2.7 microm in diameter, from the water column. Two 20 L samples can be filtered simultaneously using a single pump unit equipped with four rotating heads. Filtration is done in the field on extended trips, or immediately upon return for day trips. It is important to record the amount of water passing through each sterivex filter unit. To prevent biofilm formation between sampling trips, all filtration equipment must be rinsed with dilute HCl and deionized water and autoclaved immediately after use. This procedure will take approximately 5 hours plus an additional hour for clean up.

MeSH Terms
Biomass Filtration/methods Seawater/analysis,microbiology Water Microbiology
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Walsh David A
Department of Microbiology and Immunology, University of British Columbia.
Zaikova Elena
Hallam Steven J
Article Info
Journal
Journal of visualized experiments : JoVE
Abbr.
J Vis Exp
ISSN
1940-087X
Published
2009-06-18
Epub
2009-00-18
Language
English
Region
United States
NLM ID
101313252
PMCID
PMC3253652
Subset
IM
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