Home LiteratureArticle Details
PMID: 19898482 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Genetic variants in TPMT and COMT are associated with hearing loss in children receiving cisplatin chemotherapy.

Nature genetics ·Vol. 41 ·No. 12 ·2009-12-00 ·Pages 1345-9

Ross CJ, Katzov-Eckert H, Dubé MP, Brooks B, Rassekh SR, Barhdadi A, Feroz-Zada Y, Visscher H, Brown AM, Rieder MJ, Rogers PC, Phillips MS, Carleton BC, Hayden MR, CPNDS Consortium

Abstract

Cisplatin is a widely used and effective chemotherapeutic agent, although its use is restricted by the high incidence of irreversible ototoxicity associated with it. In children, cisplatin ototoxicity is a serious and pervasive problem, affecting more than 60% of those receiving cisplatin and compromising language and cognitive development. Candidate gene studies have previously reported associations of cisplatin ototoxicity with genetic variants in the genes encoding glutathione S-transferases and megalin. We report association analyses for 220 drug-metabolism genes in genetic susceptibility to cisplatin-induced hearing loss in children. We genotyped 1,949 SNPs in these candidate genes in an initial cohort of 54 children treated in pediatric oncology units, with replication in a second cohort of 112 children recruited through a national surveillance network for adverse drug reactions in Canada. We identified genetic variants in TPMT (rs12201199, P value = 0.00022, OR = 17.0, 95% CI 2.3-125.9) and COMT (rs9332377, P value = 0.00018, OR = 5.5, 95% CI 1.9-15.9) associated with cisplatin-induced hearing loss in children.

MeSH Terms
Antineoplastic Agents/adverse effects,therapeutic use Catechol O-Methyltransferase/genetics Child Cisplatin/adverse effects,therapeutic use Cohort Studies Genetic Variation Hearing Loss/chemically induced,genetics Humans Methyltransferases/genetics Polymorphism, Single Nucleotide
Chemicals
Antineoplastic Agents Methyltransferases Catechol O-Methyltransferase thiopurine methyltransferase Cisplatin
Authors & Affiliations
15 authors, click to expand affiliations / ORCID
Ross Colin J D
Department of Medical Genetics, University of British Columbia, Centre for Molecular Medicine and Therapeutics, Vancouver, British Columbia, Canada.
Katzov-Eckert Hagit
Dubé Marie-Pierre
Brooks Beth
Rassekh S Rod
Barhdadi Amina
Feroz-Zada Yassamin
Visscher Henk
Brown Andrew M K
Rieder Michael J
Rogers Paul C
Phillips Michael S
Carleton Bruce C
Hayden Michael R
CPNDS Consortium
Investigators
61 investigators, click to expand
Hayden Michael
Carleton Bruce
Ross Colin
Smith Anne
MacLeod Stuart
Wasserman Wyeth
Hildebrand Claudette
Castro Lucila
Ghannadan Reza
Carter Catherine
Honeyman Graeme
Katzov Hagit
Rassekh Rod
Lau Lily
Lim Jonathan
Miao Fudan
Mitton Craig
Ng Dawn
Pape Terry
Stannard Peter
Visscher Henk
Zhang Lin Hwa
Nijssen-Jordan Cheri
Johnson David
Verbeek Linda
Kaczowka Rick
Churcher Linda
Grundy Paul
Stobart Kent
Wilson Bev
Desai Sunil
Hall Kevin
Chan Shanna
Grarnham Byron
Staub Michelle
Rieder Michael
Malkin Becky
Madadi Parvaz
Cranston Amy
Portwine Carol
Koren Gideon
Ito Shinya
Garcia Facundo
Inoue Miho
Sakaguchi Sachi
Tanaka Toshihiro
Vaillancourt Regis
Elliott-Miller Pat
Mankoo Herpreet
Wong Elaine
Wilson Brenda
Maher Maurica
Bussières Jean-Francois
Lebel Denis
Barret Pierre
Dubé Marie-Pierre
Phillips Michael
Avard Denise
Murray Margaret
Boliver Darlene
Osborne Carol-anne
References (33)
33 references, click to expand
  1. Ototoxicity of cisplatinum.
    Br J Cancer. 1991 Jan;63(1):159-60 PMID: 1989659
  2. Mercaptopurine pharmacogenetics: monogenic inheritance of erythrocyte thiopurine methyltransferase activity.
    Am J Hum Genet. 1980 Sep;32(5):651-62 PMID: 7191632
  3. Ototoxicity from high-dose use of platinum compounds in patients with neuroblastoma.
    Cancer. 2006 Jul 15;107(2):417-22 PMID: 16779793
  4. Risk factors for ototoxicity due to cisplatin.
    Arch Otolaryngol Head Neck Surg. 1994 May;120(5):541-6 PMID: 8172706
  5. Human catechol-O-methyltransferase haplotypes modulate protein expression by altering mRNA secondary structure.
    Science. 2006 Dec 22;314(5807):1930-3 PMID: 17185601
  6. SLCO1B1 variants and statin-induced myopathy--a genomewide study.
    N Engl J Med. 2008 Aug 21;359(8):789-99 PMID: 18650507
  7. Mercaptopurine therapy intolerance and heterozygosity at the thiopurine S-methyltransferase gene locus.
    J Natl Cancer Inst. 1999 Dec 1;91(23):2001-8 PMID: 10580024
  8. A multiple testing correction method for genetic association studies using correlated single nucleotide polymorphisms.
    Genet Epidemiol. 2008 May;32(4):361-9 PMID: 18271029
  9. A haplotype map of the human genome.
    Nature. 2005 Oct 27;437(7063):1299-320 PMID: 16255080
  10. Genetic basis for individual variations in pain perception and the development of a chronic pain condition.
    Hum Mol Genet. 2005 Jan 1;14(1):135-43 PMID: 15537663
  11. Genome-wide association studies for common diseases and complex traits.
    Nat Rev Genet. 2005 Feb;6(2):95-108 PMID: 15716906
  12. Application of principal component analysis to pharmacogenomic studies in Canada.
    Pharmacogenomics J. 2009 Dec;9(6):362-72 PMID: 19652663
  13. Principal components analysis corrects for stratification in genome-wide association studies.
    Nat Genet. 2006 Aug;38(8):904-9 PMID: 16862161
  14. Ototoxicity in children receiving platinum chemotherapy: underestimating a commonly occurring toxicity that may influence academic and social development.
    J Clin Oncol. 2005 Dec 1;23(34):8588-96 PMID: 16314621
  15. Methylation of mercaptopurine, thioguanine, and their nucleotide metabolites by heterologously expressed human thiopurine S-methyltransferase.
    Mol Pharmacol. 1995 Jun;47(6):1141-7 PMID: 7603453
  16. Mutations of LRTOMT, a fusion gene with alternative reading frames, cause nonsyndromic deafness in humans.
    Nat Genet. 2008 Nov;40(11):1335-40 PMID: 18953341
  17. Ototoxicity from cisplatin therapy in childhood cancer.
    J Pediatr Hematol Oncol. 2007 Jun;29(6):355-60 PMID: 17551394
  18. Genome-wide approaches to identify pharmacogenetic contributions to adverse drug reactions.
    Pharmacogenomics J. 2009 Feb;9(1):23-33 PMID: 18301416
  19. Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium.
    Am J Hum Genet. 2004 Jan;74(1):106-20 PMID: 14681826
  20. Effect of concurrent medications on cisplatin-induced nephrotoxicity in patients with head and neck cancer.
    Anticancer Drugs. 2006 Feb;17(2):207-15 PMID: 16428940
  21. Cisplatin-induced long-term hearing impairment is associated with specific glutathione s-transferase genotypes in testicular cancer survivors.
    J Clin Oncol. 2007 Feb 20;25(6):708-14 PMID: 17228018
  22. Predicting cisplatin ototoxicity in children: the influence of age and the cumulative dose.
    Eur J Cancer. 2004 Nov;40(16):2445-51 PMID: 15519518
  23. Molecular diagnosis of thiopurine S-methyltransferase deficiency: genetic basis for azathioprine and mercaptopurine intolerance.
    Ann Intern Med. 1997 Apr 15;126(8):608-14 PMID: 9103127
  24. Glutathione S-transferase genetic polymorphisms and individual sensitivity to the ototoxic effect of cisplatin.
    Anticancer Drugs. 2000 Sep;11(8):639-43 PMID: 11081456
  25. Megalin genetic polymorphisms and individual sensitivity to the ototoxic effect of cisplatin.
    Pharmacogenomics J. 2008 Feb;8(1):23-8 PMID: 17457342
  26. Genotypic approaches to therapy in children: a national active surveillance network (GATC) to study the pharmacogenomics of severe adverse drug reactions in children.
    Ann N Y Acad Sci. 2007 Sep;1110:177-92 PMID: 17911433
  27. Functional characterization of 23 allelic variants of thiopurine S-methyltransferase gene (TPMT*2 - *24).
    Pharmacogenet Genomics. 2008 Oct;18(10):887-93 PMID: 18708949
  28. S-Adenosyl-L-methionine increases serum BUN and creatinine in cisplatin-treated mice.
    Arch Med Res. 2009 Jan;40(1):54-8 PMID: 19064128
  29. Cisplatin-induced hearing loss: influence of the mode of drug administration in the guinea pig.
    Hear Res. 2000 Feb;140(1-2):38-44 PMID: 10675634
  30. Children with minimal sensorineural hearing loss: prevalence, educational performance, and functional status.
    Ear Hear. 1998 Oct;19(5):339-54 PMID: 9796643
  31. Pharmacogenomics: catechol O-methyltransferase to thiopurine S-methyltransferase.
    Cell Mol Neurobiol. 2006 Jul-Aug;26(4-6):539-61 PMID: 16807786
  32. A catechol-O-methyltransferase that is essential for auditory function in mice and humans.
    Proc Natl Acad Sci U S A. 2008 Sep 23;105(38):14609-14 PMID: 18794526
  33. Performing the exact test of Hardy-Weinberg proportion for multiple alleles.
    Biometrics. 1992 Jun;48(2):361-72 PMID: 1637966
Article Info
Journal
Nature genetics
Abbr.
Nat Genet
ISSN
1546-1718
Published
2009-12-00
Epub
2009-00-08
Pages
1345-9
Language
English
Region
United States
NLM ID
9216904
Subset
IM
Grants
Canadian Institutes of Health Research · Canada
Corrections
ErratumIn
-
CommentIn
CommentIn
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]