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PMID: 19908865 Published · ppublish English Journal Article Research Support, N.I.H., Extramural

Evidence for the involvement of human DNA polymerase N in the repair of DNA interstrand cross-links.

Biochemistry ·Vol. 48 ·No. 49 ·2009-12-15 ·Pages 11817-24

Zietlow L, Smith LA, Bessho M, Bessho T

Abstract

Human DNA polymerase N (PolN) is an A-family nuclear DNA polymerase whose function is unknown. This study examines the possible role of PolN in DNA repair in human cells treated with PolN-targeted siRNA. HeLa cells with siRNA-mediated knockdown of PolN were more sensitive than control cells to DNA cross-linking agent mitomycin C (MMC) but were not hypersensitive to UV irradiation. The MMC hypersensitivity of PolN knockdown cells was rescued by the overexpression of DNA polymerase-proficient PolN but not by DNA polymerase-deficient PolN. Furthermore, in vitro experiments showed that purified PolN conducts low-efficiency nonmutagenic bypass of a psoralen DNA interstrand cross-link (ICL), whose structure resembles an intermediate in the proposed pathway of ICL repair. These results suggest that PolN might play a role in translesion DNA synthesis during ICL repair in human cells.

MeSH Terms
Base Sequence Cell Nucleus/drug effects,enzymology,genetics Cross-Linking Reagents/pharmacology DNA Damage/genetics DNA Helicases/chemistry,physiology DNA Repair/drug effects,genetics DNA Repair Enzymes/chemistry,physiology DNA-Binding Proteins/genetics DNA-Directed DNA Polymerase/biosynthesis,chemistry,deficiency,genetics,physiology HeLa Cells Humans Mitomycin/pharmacology Molecular Sequence Data Nuclear Proteins/biosynthesis,deficiency,genetics,physiology RNA, Small Interfering/pharmacology
Chemicals
Cross-Linking Reagents DNA-Binding Proteins Nuclear Proteins RNA, Small Interfering xeroderma pigmentosum group F protein Mitomycin DNA-Directed DNA Polymerase POLN protein, human DNA Helicases DNA Repair Enzymes
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Zietlow Laura
The Eppley Institute for Research in Cancer and Allied Diseases, University of Nebraska Medical Center, 986805 Nebraska Medical Center, Omaha, Nebraska 68198-6805, USA.
Smith Leigh Anne
Bessho Mika
Bessho Tadayoshi
References (43)
43 references, click to expand
  1. Repair kinetics of genomic interstrand DNA cross-links: evidence for DNA double-strand break-dependent activation of the Fanconi anemia/BRCA pathway.
    Mol Cell Biol. 2004 Jan;24(1):123-34 PMID: 14673148
  2. The mouse genomic instability mutation chaos1 is an allele of Polq that exhibits genetic interaction with Atm.
    Mol Cell Biol. 2004 Dec;24(23):10381-9 PMID: 15542845
  3. Translesion synthesis: Y-family polymerases and the polymerase switch.
    DNA Repair (Amst). 2007 Jul 1;6(7):891-9 PMID: 17363342
  4. Emergence of a DNA-damage response network consisting of Fanconi anaemia and BRCA proteins.
    Nat Rev Genet. 2007 Oct;8(10):735-48 PMID: 17768402
  5. Human DNA polymerase N (POLN) is a low fidelity enzyme capable of error-free bypass of 5S-thymine glycol.
    J Biol Chem. 2006 Aug 18;281(33):23445-55 PMID: 16787914
  6. Caenorhabditis elegans POLQ-1 and HEL-308 function in two distinct DNA interstrand cross-link repair pathways.
    DNA Repair (Amst). 2008 Jun 1;7(6):941-50 PMID: 18472307
  7. DNA polymerase theta is preferentially expressed in lymphoid tissues and upregulated in human cancers.
    Int J Cancer. 2004 Mar;109(1):9-16 PMID: 14735462
  8. POLN, a nuclear PolA family DNA polymerase homologous to the DNA cross-link sensitivity protein Mus308.
    J Biol Chem. 2003 Aug 22;278(34):32014-9 PMID: 12794064
  9. Damage control: the pleiotropy of DNA repair genes in Drosophila melanogaster.
    Genetics. 1998 Apr;148(4):1587-98 PMID: 9560378
  10. PCNA, the maestro of the replication fork.
    Cell. 2007 May 18;129(4):665-79 PMID: 17512402
  11. DNA polymerase I-mediated translesion synthesis in RecA-independent DNA interstrand cross-link repair in E. coli.
    Biochemistry. 2008 May 13;47(19):5460-4 PMID: 18416557
  12. Molecular cloning of Drosophila mus308, a gene involved in DNA cross-link repair with homology to prokaryotic DNA polymerase I genes.
    Mol Cell Biol. 1996 Oct;16(10):5764-71 PMID: 8816490
  13. Vertebrate POLQ and POLbeta cooperate in base excision repair of oxidative DNA damage.
    Mol Cell. 2006 Oct 6;24(1):115-25 PMID: 17018297
  14. Loss of DNA polymerase zeta causes chromosomal instability in mammalian cells.
    Cancer Res. 2006 Jan 1;66(1):134-42 PMID: 16397225
  15. Getting a grip on how DNA polymerases function.
    Nat Struct Biol. 2001 Aug;8(8):656-9 PMID: 11473246
  16. Arabidopsis TEBICHI, with helicase and DNA polymerase domains, is required for regulated cell division and differentiation in meristems.
    Plant Cell. 2006 Apr;18(4):879-92 PMID: 16517762
  17. Fanconi anemia (cross)linked to DNA repair.
    Cell. 2005 Dec 29;123(7):1191-8 PMID: 16377561
  18. DNA polymerase zeta (pol zeta) in higher eukaryotes.
    Cell Res. 2008 Jan;18(1):174-83 PMID: 18157155
  19. hMutSbeta is required for the recognition and uncoupling of psoralen interstrand cross-links in vitro.
    Mol Cell Biol. 2002 Apr;22(7):2388-97 PMID: 11884621
  20. Defining the roles of nucleotide excision repair and recombination in the repair of DNA interstrand cross-links in mammalian cells.
    Mol Cell Biol. 2000 Nov;20(21):7980-90 PMID: 11027268
  21. Mechanism of abasic lesion bypass catalyzed by a Y-family DNA polymerase.
    J Biol Chem. 2007 Mar 16;282(11):8188-98 PMID: 17210571
  22. Cloning and chromosomal mapping of the human DNA polymerase theta (POLQ), the eighth human DNA polymerase.
    Genomics. 1999 Jul 1;59(1):90-6 PMID: 10395804
  23. Formation and repair of interstrand cross-links in DNA.
    Chem Rev. 2006 Feb;106(2):277-301 PMID: 16464006
  24. Nucleotide excision repair- and polymerase eta-mediated error-prone removal of mitomycin C interstrand cross-links.
    Mol Cell Biol. 2003 Jan;23(2):754-61 PMID: 12509472
  25. High-efficiency bypass of DNA damage by human DNA polymerase Q.
    EMBO J. 2004 Nov 10;23(22):4484-94 PMID: 15496986
  26. Sequence dependence for bypass of thymine glycols in DNA by DNA polymerase I.
    Nucleic Acids Res. 1986 Jan 24;14(2):1045-61 PMID: 3945552
  27. POLQ (Pol theta), a DNA polymerase and DNA-dependent ATPase in human cells.
    Nucleic Acids Res. 2003 Nov 1;31(21):6117-26 PMID: 14576298
  28. Thymine glycols and urea residues in M13 DNA constitute replicative blocks in vitro.
    Nucleic Acids Res. 1985 Nov 25;13(22):8035-52 PMID: 3906566
  29. DNA polymerase theta (POLQ) can extend from mismatches and from bases opposite a (6-4) photoproduct.
    DNA Repair (Amst). 2008 Jan 1;7(1):119-27 PMID: 17920341
  30. DNA polymerase eta reduces the gamma-H2AX response to psoralen interstrand crosslinks in human cells.
    Exp Cell Res. 2008 Feb 15;314(4):887-95 PMID: 18068156
  31. Roles of DNA polymerases in replication, repair, and recombination in eukaryotes.
    Int Rev Cytol. 2006;255:41-132 PMID: 17178465
  32. 8-oxo-guanine bypass by human DNA polymerases in the presence of auxiliary proteins.
    Nature. 2007 May 31;447(7144):606-8 PMID: 17507928
  33. Eukaryotic translesion synthesis DNA polymerases: specificity of structure and function.
    Annu Rev Biochem. 2005;74:317-53 PMID: 15952890
  34. The role of BRCA2 in replication-coupled DNA interstrand cross-link repair in vitro.
    Nat Struct Mol Biol. 2006 Aug;13(8):729-33 PMID: 16845393
  35. Induction of DNA replication-mediated double strand breaks by psoralen DNA interstrand cross-links.
    J Biol Chem. 2003 Feb 14;278(7):5250-4 PMID: 12473662
  36. Eukaryotic DNA damage tolerance and translesion synthesis through covalent modifications of PCNA.
    Cell Res. 2008 Jan;18(1):162-73 PMID: 18157158
  37. Sloppy bypass of an abasic lesion catalyzed by a Y-family DNA polymerase.
    J Biol Chem. 2007 Mar 16;282(11):8199-206 PMID: 17234630
  38. Repair of an interstrand DNA cross-link initiated by ERCC1-XPF repair/recombination nuclease.
    J Biol Chem. 2000 Aug 25;275(34):26632-6 PMID: 10882712
  39. DNA replication is required To elicit cellular responses to psoralen-induced DNA interstrand cross-links.
    Mol Cell Biol. 2000 Nov;20(21):8283-9 PMID: 11027296
  40. mus308 mutants of Drosophila exhibit hypersensitivity to DNA cross-linking agents and are defective in a deoxyribonuclease.
    Genetics. 1990 Aug;125(4):813-9 PMID: 2397884
  41. Repair of DNA interstrand cross-links.
    Mutat Res. 2001 Sep 4;486(4):217-47 PMID: 11516927
  42. Processing of a psoralen DNA interstrand cross-link by XPF-ERCC1 complex in vitro.
    J Biol Chem. 2008 Jan 18;283(3):1275-1281 PMID: 18006494
  43. DNA polymerase active site is highly mutable: evolutionary consequences.
    Proc Natl Acad Sci U S A. 2000 May 9;97(10):5095-100 PMID: 10805772
Article Info
Journal
Biochemistry
Abbr.
Biochemistry
ISSN
1520-4995
Published
2009-12-15
Pages
11817-24
Language
English
Region
United States
NLM ID
0370623
PMCID
PMC2790558
Subset
IM
Grants
NCI NIH HHS · 5T32 CA09476 · United States
NCI NIH HHS · R01 CA95291 · United States
NCRR NIH HHS · P20 RR016469 · United States
NCI NIH HHS · P30 CA036727 · United States
NCI NIH HHS · T32 CA009476 · United States
NCI NIH HHS · P30CA036727 · United States
NCI NIH HHS · R01 CA095291-05 · United States
NIGMS NIH HHS · R01 GM080458-02 · United States
NCI NIH HHS · R01 CA095291 · United States
NIGMS NIH HHS · R01 GM080458 · United States
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