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PMID: 20223773 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Efficient inhibition of miR-155 function in vivo by peptide nucleic acids.

Nucleic acids research ·Vol. 38 ·No. 13 ·2010-07-00 ·Pages 4466-75

Fabani MM, Abreu-Goodger C, Williams D, Lyons PA, Torres AG, Smith KG, Enright AJ, Gait MJ, Vigorito E

Abstract

MicroRNAs (miRNAs) play an important role in diverse physiological processes and are potential therapeutic agents. Synthetic oligonucleotides (ONs) of different chemistries have proven successful for blocking miRNA expression. However, their specificity and efficiency have not been fully evaluated. Here, we show that peptide nucleic acids (PNAs) efficiently block a key inducible miRNA expressed in the haematopoietic system, miR-155, in cultured B cells as well as in mice. Remarkably, miR-155 inhibition by PNA in primary B cells was achieved in the absence of any transfection agent. In mice, the high efficiency of the treatment was demonstrated by a strong overlap in global gene expression between B cells isolated from anti-miR-155 PNA-treated and miR-155-deficient mice. Interestingly, PNA also induced additional changes in gene expression. Our analysis provides a useful platform to aid the design of efficient and specific anti-miRNA ONs for in vivo use.

MeSH Terms
Animals B-Lymphocytes/metabolism Binding Sites Cells, Cultured Gene Expression Profiling Gene Expression Regulation Mice Mice, Inbred C57BL Mice, Knockout MicroRNAs/antagonists & inhibitors,genetics,metabolism Microwaves Peptide Nucleic Acids/chemical synthesis RNA, Messenger/chemistry,metabolism
Chemicals
MicroRNAs Mirn155 microRNA, mouse Peptide Nucleic Acids RNA, Messenger
Authors & Affiliations
9 authors, click to expand affiliations / ORCID
Fabani Martin M
Medical Research Council, Laboratory of Molecular Biology, Cambridge CB2 0QH, UK. [email protected]
Abreu-Goodger Cei
Williams Donna
Lyons Paul A
Torres Adrian G
Smith Kenneth G C
Enright Anton J
Gait Michael J
Vigorito Elena
References (41)
41 references, click to expand
  1. Automated synthesis of peptide nucleic acids and peptide nucleic acid-peptide conjugates.
    Anal Biochem. 1999 Mar 15;268(2):401-4 PMID: 10075832
  2. Systemically delivered antisense oligomers upregulate gene expression in mouse tissues.
    Nat Biotechnol. 2002 Dec;20(12):1228-33 PMID: 12426578
  3. High expression of B-cell receptor inducible gene BIC in all subtypes of Hodgkin lymphoma.
    Genes Chromosomes Cancer. 2003 May;37(1):20-8 PMID: 12661002
  4. PI3K in lymphocyte development, differentiation and activation.
    Nat Rev Immunol. 2003 Apr;3(4):317-30 PMID: 12669022
  5. Bioconductor: open software development for computational biology and bioinformatics.
    Genome Biol. 2004;5(10):R80 PMID: 15461798
  6. Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets.
    Cell. 2005 Jan 14;120(1):15-20 PMID: 15652477
  7. Accumulation of miR-155 and BIC RNA in human B cell lymphomas.
    Proc Natl Acad Sci U S A. 2005 Mar 8;102(10):3627-32 PMID: 15738415
  8. Therapeutically promising PNA complementary to a regulatory sequence for c-myc: pharmacokinetics in an animal model of human Burkitt's lymphoma.
    Oligonucleotides. 2005 Summer;15(2):85-93 PMID: 15989423
  9. Modulation of hepatitis C virus RNA abundance by a liver-specific MicroRNA.
    Science. 2005 Sep 2;309(5740):1577-81 PMID: 16141076
  10. Silencing of microRNAs in vivo with 'antagomirs'.
    Nature. 2005 Dec 1;438(7068):685-9 PMID: 16258535
  11. Cell-penetrating peptide conjugates of peptide nucleic acids (PNA) as inhibitors of HIV-1 Tat-dependent trans-activation in cells.
    Nucleic Acids Res. 2005 Nov 30;33(21):6837-49 PMID: 16321967
  12. miR-122 regulation of lipid metabolism revealed by in vivo antisense targeting.
    Cell Metab. 2006 Feb;3(2):87-98 PMID: 16459310
  13. Pre-B cell proliferation and lymphoblastic leukemia/high-grade lymphoma in E(mu)-miR155 transgenic mice.
    Proc Natl Acad Sci U S A. 2006 May 2;103(18):7024-9 PMID: 16641092
  14. Linear models and empirical bayes methods for assessing differential expression in microarray experiments.
    Stat Appl Genet Mol Biol. 2004;3:Article3 PMID: 16646809
  15. MicroRNA-155 regulates human angiotensin II type 1 receptor expression in fibroblasts.
    J Biol Chem. 2006 Jul 7;281(27):18277-84 PMID: 16675453
  16. Rapid solid-phase peptide synthesis using thermal and controlled microwave irradiation.
    J Pept Sci. 2006 Oct;12(10):633-8 PMID: 16789045
  17. Transfection and gene expression in normal and malignant primary B lymphocytes.
    J Immunol Methods. 1990 Oct 4;133(1):77-85 PMID: 1698880
  18. MicroRNA signatures in human cancers.
    Nat Rev Cancer. 2006 Nov;6(11):857-66 PMID: 17060945
  19. Repression of protein synthesis by miRNAs: how many mechanisms?
    Trends Cell Biol. 2007 Mar;17(3):118-26 PMID: 17197185
  20. Regulation of the germinal center response by microRNA-155.
    Science. 2007 Apr 27;316(5824):604-8 PMID: 17463289
  21. Requirement of bic/microRNA-155 for normal immune function.
    Science. 2007 Apr 27;316(5824):608-11 PMID: 17463290
  22. Efficient nucleofection of primary human B cells and B-CLL cells induces apoptosis, which depends on the microenvironment and on the structure of transfected nucleic acids.
    Leukemia. 2007 Sep;21(9):1977-83 PMID: 17637809
  23. Peptide nucleic acid synthesis by novel amide formation.
    Org Lett. 2007 Aug 16;9(17):3291-3 PMID: 17661472
  24. Modulation of miR-155 and miR-125b levels following lipopolysaccharide/TNF-alpha stimulation and their possible roles in regulating the response to endotoxin shock.
    J Immunol. 2007 Oct 15;179(8):5082-9 PMID: 17911593
  25. Effective exon skipping and restoration of dystrophin expression by peptide nucleic acid antisense oligonucleotides in mdx mice.
    Mol Ther. 2008 Jan;16(1):38-45 PMID: 17968354
  26. miRBase: tools for microRNA genomics.
    Nucleic Acids Res. 2008 Jan;36(Database issue):D154-8 PMID: 17991681
  27. Cell penetrating peptide conjugates of steric block oligonucleotides.
    Adv Drug Deliv Rev. 2008 Mar 1;60(4-5):517-29 PMID: 18037527
  28. microRNA-155 regulates the generation of immunoglobulin class-switched plasma cells.
    Immunity. 2007 Dec;27(6):847-59 PMID: 18055230
  29. miR-122 targeting with LNA/2'-O-methyl oligonucleotide mixmers, peptide nucleic acids (PNA), and PNA-peptide conjugates.
    RNA. 2008 Feb;14(2):336-46 PMID: 18073344
  30. Sustained expression of microRNA-155 in hematopoietic stem cells causes a myeloproliferative disorder.
    J Exp Med. 2008 Mar 17;205(3):585-94 PMID: 18299402
  31. Single acute-dose and repeat-doses toxicity of anti-HIV-1 PNA TAR-penetratin conjugate after intraperitoneal administration to mice.
    Oligonucleotides. 2008 Spring;18(1):9-20 PMID: 18321159
  32. miRNA analysis in B-cell chronic lymphocytic leukaemia: proliferation centres characterized by low miR-150 and high BIC/miR-155 expression.
    J Pathol. 2008 May;215(1):13-20 PMID: 18348159
  33. MicroRNA-155 is an Epstein-Barr virus-induced gene that modulates Epstein-Barr virus-regulated gene expression pathways.
    J Virol. 2008 Jun;82(11):5295-306 PMID: 18367535
  34. LNA-mediated microRNA silencing in non-human primates.
    Nature. 2008 Apr 17;452(7189):896-9 PMID: 18368051
  35. MicroRNA-155 is a negative regulator of activation-induced cytidine deaminase.
    Immunity. 2008 May;28(5):621-9 PMID: 18450484
  36. Detecting microRNA binding and siRNA off-target effects from expression data.
    Nat Methods. 2008 Dec;5(12):1023-5 PMID: 18978784
  37. Inositol phosphatase SHIP1 is a primary target of miR-155.
    Proc Natl Acad Sci U S A. 2009 Apr 28;106(17):7113-8 PMID: 19359473
  38. Silencing of microRNA-155 in mice during acute inflammatory response leads to derepression of c/ebp Beta and down-regulation of G-CSF.
    Nucleic Acids Res. 2009 Sep;37(17):5784-92 PMID: 19596814
  39. Onco-miR-155 targets SHIP1 to promote TNFalpha-dependent growth of B cell lymphomas.
    EMBO Mol Med. 2009 Aug;1(5):288-95 PMID: 19890474
  40. Therapeutic silencing of microRNA-122 in primates with chronic hepatitis C virus infection.
    Science. 2010 Jan 8;327(5962):198-201 PMID: 19965718
  41. PNA: Synthetic Polyamide Nucleic Acids with Unusual Binding Properties.
    Angew Chem Int Ed Engl. 1998 Nov 2;37(20):2796-2823 PMID: 29711102
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
1362-4962
Published
2010-07-00
Epub
2010-00-11
Pages
4466-75
Language
English
Region
England
NLM ID
0411011
PMCID
PMC2910044
Subset
IM
Grants
Medical Research Council · G0700287 · United Kingdom
Medical Research Council · MC_U105178803 · United Kingdom
Biotechnology and Biological Sciences Research Council · United Kingdom
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