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PMID: 20382761 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Complete genome sequence of "Candidatus Puniceispirillum marinum" IMCC1322, a representative of the SAR116 clade in the Alphaproteobacteria.

Journal of bacteriology ·Vol. 192 ·No. 12 ·2010-06-00 ·Pages 3240-1

Oh HM, Kwon KK, Kang I, Kang SG, Lee JH, Kim SJ, Cho JC

Abstract

The complete genome sequence of "Candidatus Puniceispirillum marinum" IMCC1322, the first cultured representative of the SAR116 clade in the Alphaproteobacteria, is reported here. The genome contains genes for proteorhodopsin, aerobic-type carbon monoxide dehydrogenase, dimethylsulfoniopropionate demethylase, and C(1) compound metabolism. The genome information proposes the SAR116 group to be metabolic generalists in ocean nutrient cycling.

MeSH Terms
Alphaproteobacteria/classification,genetics Genome, Bacterial Molecular Sequence Data
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Oh Hyun-Myung
Division of Biology and Ocean Sciences, Inha University, Incheon 402-751, Republic of Korea.
Kwon Kae Kyoung
Kang Ilnam
Kang Sung Gyun
Lee Jung-Hyun
Kim Sang-Jin
Cho Jang-Cheon
References (8)
8 references, click to expand
  1. Genome streamlining in a cosmopolitan oceanic bacterium.
    Science. 2005 Aug 19;309(5738):1242-5 PMID: 16109880
  2. Phylogenetic analysis of a natural marine bacterioplankton population by rRNA gene cloning and sequencing.
    Appl Environ Microbiol. 1991 Jun;57(6):1707-13 PMID: 1714704
  3. Distribution, diversity and ecology of aerobic CO-oxidizing bacteria.
    Nat Rev Microbiol. 2007 Feb;5(2):107-18 PMID: 17224920
  4. Light-powering Escherichia coli with proteorhodopsin.
    Proc Natl Acad Sci U S A. 2007 Feb 13;104(7):2408-12 PMID: 17277079
  5. Proteorhodopsin phototrophy in the ocean.
    Nature. 2001 Jun 14;411(6839):786-9 PMID: 11459054
  6. Genetic diversity in Sargasso Sea bacterioplankton.
    Nature. 1990 May 3;345(6270):60-3 PMID: 2330053
  7. Phage_Finder: automated identification and classification of prophage regions in complete bacterial genome sequences.
    Nucleic Acids Res. 2006;34(20):5839-51 PMID: 17062630
  8. Bacterial taxa that limit sulfur flux from the ocean.
    Science. 2006 Oct 27;314(5799):649-52 PMID: 17068264
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
1098-5530
Published
2010-06-00
Epub
2010-00-09
Pages
3240-1
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC2901696
Subset
IM
Databases
GENBANK
CP001751
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