Intensity normalization improves color calling in SOLiD sequencing.

Nature methods ·Vol. 7 ·No. 5 ·2010-05-00 ·Pages 336-7

Wu H, Irizarry RA, Bravo HC

Abstract

暂无摘要

MeSH Terms

Color DNA/analysis DNA, Bacterial/analysis Escherichia coli/genetics Humans Polymorphism, Single Nucleotide Sequence Analysis, DNA/methods Software

Chemicals

DNA, Bacterial DNA

Authors & Affiliations

3 authors, click to expand affiliations / ORCID

Wu Hao

Irizarry Rafael A

Bravo Héctor Corrada

References (5)

5 references, click to expand

Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding.
Genome Res. 2009 Sep;19(9):1527-41 PMID: 19546169
International genome project launched.
Nature. 2008 Jan 24;451(7177):378-9 PMID: 18216809
BayesCall: A model-based base-calling algorithm for high-throughput short-read sequencing.
Genome Res. 2009 Oct;19(10):1884-95 PMID: 19661376
Pyrobayes: an improved base caller for SNP discovery in pyrosequences.
Nat Methods. 2008 Feb;5(2):179-81 PMID: 18193056
mRNA-Seq whole-transcriptome analysis of a single cell.
Nat Methods. 2009 May;6(5):377-82 PMID: 19349980

Article Info

Journal

Nature methods

Abbr.

Nat Methods

ISSN

1548-7105

DOI

Published

2010-05-00

Pages

336-7

Language

English

Region

United States

NLM ID

101215604

PMCID

PMC3142576

Subset

Grants

NHGRI NIH HHS · R01 HG005220 · United States

NIGMS NIH HHS · T32 GM074906 · United States

NIGMS NIH HHS · T32 GM074906-05 · United States

External Links

Analysis Services