Abstract
The integral peroxisomal membrane proteins PEX10, PEX2, and PEX12 contain a zinc RING finger close to the C terminus. Loss of function of these peroxins causes embryo lethality at the heart stage in Arabidopsis. Preventing the coordination of Zn(2+) ions by amino acid substitutions in PEX10, PEX2, and PEX12 and overexpressing the resulting conditional sublethal mutations in WT uncovered additional functions of PEX10. Plants overexpressing DeltaZn-mutant PEX10 display deformed peroxisomal shapes causing diminished contact with chloroplasts and possibly with mitochondria. These changes correlated with impaired metabolite transfer and, at high CO(2), recoverable defective photorespiration plus dwarfish phenotype. The N-terminal PEX10 domain is critical for peroxisome biogenesis and plant development. A point mutation in the highly conserved TLGEEY motif results in vermiform peroxisome shape without impairing organelle contact. Addition of an N-terminal T7 tag to WT PEX0 resulted in partially recoverable reduced growth and defective inflorescences persisting under high CO(2). In contrast, plants overexpressing PEX2-DeltaZn-T7 grow like WT in normal atmosphere, contain normal-shaped peroxisomes, but display impaired peroxisomal matrix protein import. PEX12-DeltaZn-T7 mutants exhibit unimpaired import of matrix protein and normal-shaped peroxisomes when grown in normal atmosphere. During seed germination, glyoxysomes form a reticulum around the lipid bodies for mobilization of storage oil. The formation of this glyoxysomal reticulum seemed to be impaired in PEX10-DeltaZn but not in PEX2-DeltaZn-T7 or PEX12-DeltaZn-T7 plants. Both cytosolic PEX10 domains seem essential for peroxisome structure but differ in metabolic function, suggesting a role for this plant peroxin in addition to the import of matrix protein via ubiquitination of PEX5.
MeSH Terms
Amino Acid Motifs/genetics
Amino Acid Sequence
Arabidopsis/genetics,metabolism
Arabidopsis Proteins/genetics,metabolism
Biological Transport
Carbon Dioxide/metabolism
Extracellular Matrix Proteins/metabolism
Gene Expression Regulation, Plant
Glyoxysomes/metabolism,ultrastructure
Green Fluorescent Proteins/genetics,metabolism
Membrane Proteins/genetics,metabolism
Membrane Transport Proteins/genetics,metabolism
Metabolomics/methods
Microscopy, Confocal
Microscopy, Electron
Models, Biological
Molecular Sequence Data
Mutation
Peroxins
Peroxisome-Targeting Signal 1 Receptor
Peroxisomes/metabolism,ultrastructure
Photosynthesis
Plants, Genetically Modified
RING Finger Domains/genetics
Receptors, Cytoplasmic and Nuclear/genetics,metabolism
Reverse Transcriptase Polymerase Chain Reaction
Sequence Homology, Amino Acid
Zinc Fingers/genetics
Chemicals
Arabidopsis Proteins
Extracellular Matrix Proteins
Membrane Proteins
Membrane Transport Proteins
PEX10 protein, Arabidopsis
Peroxins
Peroxisome-Targeting Signal 1 Receptor
Receptors, Cytoplasmic and Nuclear
TED3 protein, Arabidopsis
peroxin 12 protein, Arabidopsis
Carbon Dioxide
Green Fluorescent Proteins
Authors & Affiliations
9 authors, click to expand affiliations / ORCID
Prestele Jakob
LS Botanik and LS Systembiologie der Pflanzen, Technische Universität München, D-85350 Freising, Germany.
Hierl Georg
Scherling Christian
Hetkamp Stefan
Schwechheimer Claus
Isono Erika
Weckwerth Wolfram
Wanner Gerhard
Gietl Christine
References (25)
25 references, click to expand
-
Distribution and characterization of peroxisomes in Arabidopsis by visualization with GFP: dynamic morphology and actin-dependent movement.
Plant Cell Physiol. 2002 Mar;43(3):331-41
PMID: 11917088
-
A role for peroxisomes in photomorphogenesis and development of Arabidopsis.
Science. 2002 Jul 19;297(5580):405-9
PMID: 12130786
-
An Arabidopsis pex10 null mutant is embryo lethal, implicating peroxisomes in an essential role during plant embryogenesis.
Plant Physiol. 2003 Dec;133(4):1809-19
PMID: 14576288
-
Identification of PEX10, the gene defective in complementation group 7 of the peroxisome-biogenesis disorders.
Am J Hum Genet. 1998 Aug;63(2):347-59
PMID: 9683594
-
Ubiquitination of the peroxisomal import receptor Pex5p is required for its recycling.
J Cell Biol. 2007 Apr 23;177(2):197-204
PMID: 17452527
-
A cytosolic pathway for the conversion of hydroxypyruvate to glycerate during photorespiration in Arabidopsis.
Plant Cell. 2008 Oct;20(10):2848-59
PMID: 18952776
-
The Saccharomyces cerevisiae peroxisomal import receptor Pex5p is monoubiquitinated in wild type cells.
J Biol Chem. 2005 Mar 4;280(9):7867-74
PMID: 15632140
-
Plant peroxisomes.
Vitam Horm. 2005;72:111-54
PMID: 16492470
-
Arabidopsis thaliana--a model organism to study plant peroxisomes.
Biochim Biophys Acta. 2006 Dec;1763(12):1382-91
PMID: 17005266
-
PEX12 interacts with PEX5 and PEX10 and acts downstream of receptor docking in peroxisomal matrix protein import.
J Cell Biol. 1999 Nov 15;147(4):761-74
PMID: 10562279
-
AthPEX10, a nuclear gene essential for peroxisome and storage organelle formation during Arabidopsis embryogenesis.
Proc Natl Acad Sci U S A. 2003 Aug 5;100(16):9626-31
PMID: 12883010
-
An early Arabidopsis demonstration. Resolving a few issues concerning photorespiration.
Plant Physiol. 2001 Jan;125(1):20-4
PMID: 11154287
-
The Arabidopsis PEX12 gene is required for peroxisome biogenesis and is essential for development.
Plant Physiol. 2005 Sep;139(1):231-9
PMID: 16113209
-
Peroxisome biogenesis.
Rev Physiol Biochem Pharmacol. 2003;147:75-121
PMID: 12687401
-
Shuttles and cycles: transport of proteins into the peroxisome matrix (review).
Mol Membr Biol. 2008 Aug;25(5):363-75
PMID: 18651315
-
Peroxule extension over ER-defined paths constitutes a rapid subcellular response to hydroxyl stress.
Plant J. 2009 Jul;59(2):231-42
PMID: 19292761
-
Pex10p functions as an E3 ligase for the Ubc4p-dependent ubiquitination of Pex5p.
Biochem Biophys Res Commun. 2008 Oct 3;374(4):620-4
PMID: 18644345
-
Molecular anatomy of the peroxin Pex12p: ring finger domain is essential for Pex12p function and interacts with the peroxisome-targeting signal type 1-receptor Pex5p and a ring peroxin, Pex10p.
J Biol Chem. 2000 Aug 18;275(33):25700-10
PMID: 10837480
-
Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis.
Plant Physiol. 2005 Jan;137(1):13-30
PMID: 15644464
-
The Arabidopsis pex12 and pex13 mutants are defective in both PTS1- and PTS2-dependent protein transport to peroxisomes.
Plant J. 2006 Aug;47(4):604-18
PMID: 16813573
-
Pex10p links the ubiquitin conjugating enzyme Pex4p to the protein import machinery of the peroxisome.
J Cell Sci. 2003 Sep 1;116(Pt 17):3623-34
PMID: 12876220
-
Requirement of the C3HC4 zinc RING finger of the Arabidopsis PEX10 for photorespiration and leaf peroxisome contact with chloroplasts.
Proc Natl Acad Sci U S A. 2007 Jan 16;104(3):1069-74
PMID: 17215364
-
Functional classification of Arabidopsis peroxisome biogenesis factors proposed from analyses of knockdown mutants.
Plant Cell Physiol. 2007 Jun;48(6):763-74
PMID: 17478547
-
Plant peroxisomes respire in the light: some gaps of the photorespiratory C2 cycle have become filled--others remain.
Biochim Biophys Acta. 2006 Dec;1763(12):1496-510
PMID: 17046077
-
Ubiquitination of the peroxisomal targeting signal type 1 receptor, Pex5p, suggests the presence of a quality control mechanism during peroxisomal matrix protein import.
J Biol Chem. 2005 Jan 21;280(3):1921-30
PMID: 15536088