Abstract
Normal RAS proteins play a key role of molecular switch in the transduction of the growth signal from extracellular to intracellular space. The state of the switch is "on" when GTP is bound and "off" when GDP is bound to the protein. The crystal structure of a complex between a nonhydrolyzable GTP analog and the catalytic domain of a RAS protein has been determined by a rotation-translation search method. The orientations and positions of four independent molecules have been determined using a single molecule as a probe in the search. The crystal structure reveals that the gamma phosphate of the GTP analog induces extensive conformational changes on two loop regions of the protein.
MeSH Terms
Amino Acid Sequence
Binding Sites
Cloning, Molecular
Crystallization
Escherichia coli/genetics
Guanosine Triphosphate/analogs & derivatives,metabolism
Models, Molecular
Molecular Sequence Data
Protein Binding
Protein Conformation
Protein-Tyrosine Kinases
Proto-Oncogene Proteins/genetics,isolation & purification,metabolism
Proto-Oncogene Proteins p21(ras)
Recombinant Proteins/isolation & purification,metabolism
Chemicals
Proto-Oncogene Proteins
Recombinant Proteins
guanosine 5'-(beta,gamma-methylene)triphosphate
Guanosine Triphosphate
Protein-Tyrosine Kinases
Proto-Oncogene Proteins p21(ras)
Authors & Affiliations
9 authors, click to expand affiliations / ORCID
Brünger A T
Howard Hughes Medical Institute, Yale University, New Haven, CT 06511.
Milburn M V
Tong L
deVos A M
Jancarik J
Yamaizumi Z
Nishimura S
Ohtsuka E
Kim S H
References (18)
18 references, click to expand
-
Diffraction methods for biological macromolecules. Use of the rotation and translation functions.
Methods Enzymol. 1985;115:55-77
PMID: 4079798
-
The stereochemical course of phospho transfer catalyzed by adenylosuccinate synthetase. A reaction pathway via a phosphorylated intermediate with net inversion.
J Biol Chem. 1984 Mar 10;259(5):3044-6
PMID: 6365920
-
Identification of effector residues and a neutralizing epitope of Ha-ras-encoded p21.
Proc Natl Acad Sci U S A. 1986 Jul;83(13):4725-9
PMID: 2425352
-
G proteins: a family of signal transducers.
Annu Rev Cell Biol. 1986;2:391-419
PMID: 3103658
-
G proteins: transducers of receptor-generated signals.
Annu Rev Biochem. 1987;56:615-49
PMID: 3113327
-
ras genes.
Annu Rev Biochem. 1987;56:779-827
PMID: 3304147
-
A cytoplasmic protein stimulates normal N-ras p21 GTPase, but does not affect oncogenic mutants.
Science. 1987 Oct 23;238(4826):542-5
PMID: 2821624
-
Three-dimensional structure of an oncogene protein: catalytic domain of human c-H-ras p21.
Science. 1988 Feb 19;239(4842):888-93
PMID: 2448879
-
Cloning of bovine GAP and its interaction with oncogenic ras p21.
Nature. 1988 Sep 1;335(6185):90-3
PMID: 2842690
-
Molecular cloning of two types of GAP complementary DNA from human placenta.
Science. 1988 Dec 23;242(4886):1697-700
PMID: 3201259
-
Structural differences between a ras oncogene protein and the normal protein.
Nature. 1989 Jan 5;337(6202):90-3
PMID: 2642607
-
The mechanism of guanosine nucleotide hydrolysis by p21 c-Ha-ras. The stereochemical course of the GTPase reaction.
J Biol Chem. 1989 Apr 15;264(11):6188-90
PMID: 2539374
-
Structure of ras proteins.
Science. 1989 Jul 21;245(4915):244
PMID: 2665078
-
Structure of the guanine-nucleotide-binding domain of the Ha-ras oncogene product p21 in the triphosphate conformation.
Nature. 1989 Sep 21;341(6239):209-14
PMID: 2476675
-
Molecular switch for signal transduction: structural differences between active and inactive forms of protooncogenic ras proteins.
Science. 1990 Feb 23;247(4945):939-45
PMID: 2406906
-
Refinement of the influenza virus hemagglutinin by simulated annealing.
J Mol Biol. 1990 Apr 20;212(4):737-61
PMID: 2329580
-
The role of guanosine 5'-triphosphate in polypeptide chain elongation.
Biochim Biophys Acta. 1978 Sep 21;505(1):95-127
PMID: 361078
-
Synthesis and expression of a synthetic gene for the activated human c-Ha-ras protein.
Jpn J Cancer Res. 1986 Jan;77(1):45-51
PMID: 3082814