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PMID: 21964575 Published · epublish English Journal Article Research Support, Non-U.S. Gov't

Mutations in BRIP1 confer high risk of ovarian cancer.

Nature genetics ·Vol. 43 ·No. 11 ·2011-10-02 ·Pages 1104-7

Rafnar T, Gudbjartsson DF, Sulem P, Jonasdottir A, Sigurdsson A, Jonasdottir A, Besenbacher S, Lundin P, Stacey SN, Gudmundsson J, Magnusson OT, le Roux L, Orlygsdottir G, Helgadottir HT, Johannsdottir H, Gylfason A, Tryggvadottir L, Jonasson JG, de Juan A, Ortega E, Ramon-Cajal JM, García-Prats MD, Mayordomo C, Panadero A, Rivera F, Aben KK, van Altena AM, Massuger LF, Aavikko M, Kujala PM, Staff S, Aaltonen LA, Olafsdottir K, Bjornsson J, Kong A, Salvarsdottir A, Saemundsson H, Olafsson K, Benediktsdottir KR, Gulcher J, Masson G, Kiemeney LA, Mayordomo JI, Thorsteinsdottir U, Stefansson K

Abstract

Ovarian cancer causes more deaths than any other gynecologic malignancy in developed countries. Sixteen million sequence variants, identified through whole-genome sequencing of 457 Icelanders, were imputed to 41,675 Icelanders genotyped using SNP chips, as well as to their relatives. Sequence variants were tested for association with ovarian cancer (N of affected individuals = 656). We discovered a rare (0.41% allelic frequency) frameshift mutation, c.2040_2041insTT, in the BRIP1 (FANCJ) gene that confers an increase in ovarian cancer risk (odds ratio (OR) = 8.13, P = 2.8 × 10(-14)). The mutation was also associated with increased risk of cancer in general and reduced lifespan by 3.6 years. In a Spanish population, another frameshift mutation in BRIP1, c.1702_1703del, was seen in 2 out of 144 subjects with ovarian cancer and 1 out of 1,780 control subjects (P = 0.016). This allele was also associated with breast cancer (seen in 6/927 cases; P = 0.0079). Ovarian tumors from heterozygous carriers of the Icelandic mutation show loss of the wild-type allele, indicating that BRIP1 behaves like a classical tumor suppressor gene in ovarian cancer.

MeSH Terms
DNA-Binding Proteins/genetics Fanconi Anemia Complementation Group Proteins Female Humans Mutation Ovarian Neoplasms/genetics Polymorphism, Single Nucleotide RNA Helicases/genetics
Chemicals
DNA-Binding Proteins Fanconi Anemia Complementation Group Proteins BRIP1 protein, human RNA Helicases
Authors & Affiliations
45 authors, click to expand affiliations / ORCID
Rafnar Thorunn
deCODE genetics, Reykjavik, Iceland. [email protected]
Gudbjartsson Daniel F
Sulem Patrick
Jonasdottir Aslaug
Sigurdsson Asgeir
Jonasdottir Adalbjorg
Besenbacher Soren
Lundin Pär
Stacey Simon N
Gudmundsson Julius
Magnusson Olafur T
le Roux Louise
Orlygsdottir Gudbjorg
Helgadottir Hafdis T
Johannsdottir Hrefna
Gylfason Arnaldur
Tryggvadottir Laufey
Jonasson Jon G
de Juan Ana
Ortega Eugenia
Ramon-Cajal Jose M
García-Prats Maria D
Mayordomo Carlos
Panadero Angeles
Rivera Fernando
Aben Katja K H
van Altena Anne M
Massuger Leon F A G
Aavikko Mervi
Kujala Paula M
Staff Synnöve
Aaltonen Lauri A
Olafsdottir Kristrun
Bjornsson Johannes
Kong Augustine
Salvarsdottir Anna
Saemundsson Hafsteinn
Olafsson Karl
Benediktsdottir Kristrun R
Gulcher Jeffrey
Masson Gisli
Kiemeney Lambertus A
Mayordomo Jose I
Thorsteinsdottir Unnur
Stefansson Kari
References (29)
29 references, click to expand
  1. Truncating mutations in the Fanconi anemia J gene BRIP1 are low-penetrance breast cancer susceptibility alleles.
    Nat Genet. 2006 Nov;38(11):1239-41 PMID: 17033622
  2. The contribution of the hereditary nonpolyposis colorectal cancer syndrome to the development of ovarian cancer.
    Gynecol Oncol. 2006 May;101(2):238-43 PMID: 16360201
  3. BACH1 is critical for homologous recombination and appears to be the Fanconi anemia gene product FANCJ.
    Cancer Cell. 2005 Sep;8(3):255-65 PMID: 16153896
  4. Activation of BRCA1/BRCA2-associated helicase BACH1 is required for timely progression through S phase.
    Mol Cell Biol. 2007 Oct;27(19):6733-41 PMID: 17664283
  5. A genome-wide association study identifies susceptibility loci for ovarian cancer at 2q31 and 8q24.
    Nat Genet. 2010 Oct;42(10):874-9 PMID: 20852632
  6. The BRCA1-interacting helicase BRIP1 is deficient in Fanconi anemia.
    Nat Genet. 2005 Sep;37(9):931-3 PMID: 16116424
  7. BACH1, a novel helicase-like protein, interacts directly with BRCA1 and contributes to its DNA repair function.
    Cell. 2001 Apr 6;105(1):149-60 PMID: 11301010
  8. BRCA2, but not BRCA1, mutations account for familial ovarian cancer in Iceland: a population-based study.
    Eur J Cancer. 2004 Dec;40(18):2788-93 PMID: 15571962
  9. Age- and gender-specific reference values of estimated GFR in Caucasians: the Nijmegen Biomedical Study.
    Kidney Int. 2007 Sep;72(5):632-7 PMID: 17568781
  10. BRCA1, BRCA2, and hereditary nonpolyposis colorectal cancer gene mutations in an unselected ovarian cancer population: relationship to family history and implications for genetic testing.
    Am J Obstet Gynecol. 1998 Apr;178(4):670-7 PMID: 9579428
  11. The DNA helicase BRIP1 is defective in Fanconi anemia complementation group J.
    Nat Genet. 2005 Sep;37(9):934-5 PMID: 16116423
  12. A systematic review and meta-analysis of family history and risk of ovarian cancer.
    Br J Obstet Gynaecol. 1998 May;105(5):493-9 PMID: 9637117
  13. Fast and accurate short read alignment with Burrows-Wheeler transform.
    Bioinformatics. 2009 Jul 15;25(14):1754-60 PMID: 19451168
  14. The BRCT domain is a phospho-protein binding domain.
    Science. 2003 Oct 24;302(5645):639-42 PMID: 14576433
  15. Hereditary breast cancer and the BRCA1-associated FANCJ/BACH1/BRIP1.
    Future Oncol. 2011 Feb;7(2):253-61 PMID: 21345144
  16. A high-resolution recombination map of the human genome.
    Nat Genet. 2002 Jul;31(3):241-7 PMID: 12053178
  17. Detection of sharing by descent, long-range phasing and haplotype imputation.
    Nat Genet. 2008 Sep;40(9):1068-75 PMID: 19165921
  18. A rare variant in MYH6 is associated with high risk of sick sinus syndrome.
    Nat Genet. 2011 Mar 06;43(4):316-20 PMID: 21378987
  19. The BRIP1 helicase functions independently of BRCA1 in the Fanconi anemia pathway for DNA crosslink repair.
    Nat Genet. 2005 Sep;37(9):953-7 PMID: 16116421
  20. Estimates of worldwide burden of cancer in 2008: GLOBOCAN 2008.
    Int J Cancer. 2010 Dec 15;127(12):2893-917 PMID: 21351269
  21. A single BRCA2 mutation in male and female breast cancer families from Iceland with varied cancer phenotypes.
    Nat Genet. 1996 May;13(1):117-9 PMID: 8673089
  22. A common region of deletion on chromosome 17q in both sporadic and familial epithelial ovarian tumors distal to BRCA1.
    Am J Hum Genet. 1994 Oct;55(4):666-77 PMID: 7942844
  23. A genome-wide association study identifies a new ovarian cancer susceptibility locus on 9p22.2.
    Nat Genet. 2009 Sep;41(9):996-1000 PMID: 19648919
  24. Common variants at 19p13 are associated with susceptibility to ovarian cancer.
    Nat Genet. 2010 Oct;42(10):880-4 PMID: 20852633
  25. The complete BRCA2 gene and mutations in chromosome 13q-linked kindreds.
    Nat Genet. 1996 Mar;12(3):333-7 PMID: 8589730
  26. Multiple founder effects and geographical clustering of BRCA1 and BRCA2 families in Finland.
    Eur J Hum Genet. 2000 Oct;8(10):757-63 PMID: 11039575
  27. Identification of low-frequency variants associated with gout and serum uric acid levels.
    Nat Genet. 2011 Oct 09;43(11):1127-30 PMID: 21983786
  28. A new multipoint method for genome-wide association studies by imputation of genotypes.
    Nat Genet. 2007 Jul;39(7):906-13 PMID: 17572673
  29. The contribution of BRCA1 and BRCA2 to ovarian cancer.
    Mol Oncol. 2009 Apr;3(2):138-50 PMID: 19383375
Article Info
Journal
Nature genetics
Abbr.
Nat Genet
ISSN
1546-1718
Published
2011-10-02
Epub
2011-00-02
Pages
1104-7
Language
English
Region
United States
NLM ID
9216904
Subset
IM
Databases
RefSeq
NM_032043
Analysis Services
Analysis Services

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