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PMID: 220604 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

Coupling between oxidation state and hydrogen bond conformation in heme proteins.

Valentine JS, Sheridan RP, Allen LC, Kahn PC

Abstract

In all heme proteins for which crystal structures are available, the N(epsilon) of a histidyl residue is bonded to the heme iron and N(delta) is hydrogen bonded to a carbonyl oxygen of the peptide backbone. We investigate here the possibility that a change in oxidation state of the iron or a change in the geometry of this hydrogen bond might change the hydrogen bond strength in a functionally significant way. Dimerization energies obtained from ab initio molecular orbital calculations on the hydrogen-bonded dimer of imidazole and planar formamide are used to represent the strength of this hydrogen bond in heme proteins. The effect of a change in iron oxidation state is modeled by varying the positive charge on imidazole. The effect of a change in hydrogen bond geometry is studied by employing x-ray coordinates for reduced and oxidized cytochrome c, deoxy- and metmyoglobin, and deoxy- and methemoglobin. Our conclusions are that the strength of this hydrogen bond in heme proteins is sensitive to both the oxidation state of the iron atom and to geometry changes on the order of those obtained from the x-ray coordinates. We speculate that the changes in oxidation state may be functionally coupled with changes in hydrogen bond geometry and that this hydrogen bond represents a feasible pathway to link protein conformation with redox potential or reactivity of the iron atom.

MeSH Terms
Animals Calorimetry Cytochrome c Group Fishes Hemeproteins Hemoglobins Histidine Horses Hydrogen Bonding Macromolecular Substances Myoglobin Oxidation-Reduction Protein Conformation Whales
Chemicals
Cytochrome c Group Hemeproteins Hemoglobins Macromolecular Substances Myoglobin Histidine
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Valentine J S
Sheridan R P
Allen L C
Kahn P C
References (37)
37 references, click to expand
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Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1979-03-00
Pages
1009-13
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC383176
Subset
IM
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