Abstract
The mechanisms by which functional left/right asymmetry arises in morphologically symmetric nervous systems are poorly understood. Here, we provide a mechanistic framework for how functional asymmetry in a postmitotic neuron pair is specified in C. elegans. A key feature of this mechanism is a temporally separated, two-step activation of the lsy-6 miRNA locus. The lsy-6 locus is first "primed" by chromatin decompaction in the precursor for the left neuron, but not the right neuron, several divisions before the neurons are born. lsy-6 expression is then "boosted" to functionally relevant levels several divisions later in the mother of the left neuron, through the activity of a bilaterally expressed transcription factor that can only activate lsy-6 in the primed neuron. This study shows how cells can become committed during early developmental stages to execute a specific fate much later in development and provides a conceptual framework for understanding the generation of neuronal diversity.
MeSH Terms
Animals
Base Sequence
Body Patterning
Caenorhabditis elegans/cytology,embryology,metabolism
Cell Lineage
Embryo, Nonmammalian/metabolism
Gene Expression
MicroRNAs/metabolism
Neurons/cytology,metabolism
Receptors, Notch/metabolism
Sequence Alignment
Chemicals
MIRNLsy-6 microRNA, C elegans
MicroRNAs
Receptors, Notch
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Cochella Luisa
Department of Biochemistry and Molecular Biophysics, Howard Hughes Medical Institute, Columbia University Medical Center, New York, NY 10032, USA.
[email protected]
Hobert Oliver
References (29)
29 references, click to expand
-
Neuron-type specific regulation of a 3'UTR through redundant and combinatorially acting cis-regulatory elements.
RNA. 2010 Feb;16(2):349-63
PMID: 20040592
-
Architecture of a microRNA-controlled gene regulatory network that diversifies neuronal cell fates.
Cold Spring Harb Symp Quant Biol. 2006;71:181-8
PMID: 17381295
-
The polycomb complex protein mes-2/E(z) promotes the transition from developmental plasticity to differentiation in C. elegans embryos.
Dev Cell. 2009 May;16(5):699-710
PMID: 19460346
-
Left-right asymmetry in the nervous system: the Caenorhabditis elegans model.
Nat Rev Neurosci. 2002 Aug;3(8):629-40
PMID: 12154364
-
Genetic screens for Caenorhabditis elegans mutants defective in left/right asymmetric neuronal fate specification.
Genetics. 2007 Aug;176(4):2109-30
PMID: 17717195
-
A Genome-Wide RNAi Screen for Factors Involved in Neuronal Specification in Caenorhabditis elegans.
PLoS Genet. 2011 Jun;7(6):e1002109
PMID: 21698137
-
Large-scale chromatin unfolding and remodeling induced by VP16 acidic activation domain.
J Cell Biol. 1999 Jun 28;145(7):1341-54
PMID: 10385516
-
Computer control of microscopes using µManager.
Curr Protoc Mol Biol. 2010 Oct;Chapter 14:Unit14.20
PMID: 20890901
-
The T-box transcription factors TBX-37 and TBX-38 link GLP-1/Notch signaling to mesoderm induction in C. elegans embryos.
Development. 2004 May;131(9):1967-78
PMID: 15056620
-
The spatial dynamics of tissue-specific promoters during C. elegans development.
Genes Dev. 2010 Apr 15;24(8):766-82
PMID: 20395364
-
Differential large-scale chromatin compaction and intranuclear positioning of transcribed versus non-transcribed transgene arrays containing beta-globin regulatory sequences.
J Cell Sci. 2004 Sep 1;117(Pt 19):4603-14
PMID: 15331668
-
A toolkit and robust pipeline for the generation of fosmid-based reporter genes in C. elegans.
PLoS One. 2009;4(3):e4625
PMID: 19259264
-
A microRNA controlling left/right neuronal asymmetry in Caenorhabditis elegans.
Nature. 2003 Dec 18;426(6968):845-9
PMID: 14685240
-
Hepatic specification of the gut endoderm in vitro: cell signaling and transcriptional control.
Genes Dev. 1996 Jul 1;10(13):1670-82
PMID: 8682297
-
Notch signaling in the C. elegans embryo.
WormBook. 2005 Jun 25;:1-16
PMID: 18050407
-
Lateralized gustatory behavior of C. elegans is controlled by specific receptor-type guanylyl cyclases.
Curr Biol. 2009 Jun 23;19(12):996-1004
PMID: 19523832
-
Imaging individual mRNA molecules using multiple singly labeled probes.
Nat Methods. 2008 Oct;5(10):877-9
PMID: 18806792
-
Cis-regulatory mechanisms of left/right asymmetric neuron-subtype specification in C. elegans.
Development. 2009 Jan;136(1):147-60
PMID: 19060335
-
Early embryonic programming of neuronal left/right asymmetry in C. elegans.
Curr Biol. 2006 Dec 5;16(23):2279-92
PMID: 17141609
-
Dynamic chromatin organization during foregut development mediated by the organ selector gene PHA-4/FoxA.
PLoS Genet. 2010 Aug 12;6(8):
PMID: 20714352
-
MicroRNAs acting in a double-negative feedback loop to control a neuronal cell fate decision.
Proc Natl Acad Sci U S A. 2005 Aug 30;102(35):12449-54
PMID: 16099833
-
The complete family of genes encoding G proteins of Caenorhabditis elegans.
Nat Genet. 1999 Apr;21(4):414-9
PMID: 10192394
-
The molecular signature and cis-regulatory architecture of a C. elegans gustatory neuron.
Genes Dev. 2007 Jul 1;21(13):1653-74
PMID: 17606643
-
Molecular approaches to brain asymmetry and handedness.
Nat Rev Neurosci. 2006 Aug;7(8):655-62
PMID: 16858393
-
MicroRNAs act sequentially and asymmetrically to control chemosensory laterality in the nematode.
Nature. 2004 Aug 12;430(7001):785-9
PMID: 15306811
-
Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project.
Science. 2010 Dec 24;330(6012):1775-87
PMID: 21177976
-
Assessing normal embryogenesis in Caenorhabditis elegans using a 4D microscope: variability of development and regional specification.
Dev Biol. 1997 Apr 15;184(2):234-65
PMID: 9133433
-
Cis-regulatory mutations in the Caenorhabditis elegans homeobox gene locus cog-1 affect neuronal development.
Genetics. 2009 Apr;181(4):1679-86
PMID: 19189954
-
Pioneer transcription factors: establishing competence for gene expression.
Genes Dev. 2011 Nov 1;25(21):2227-41
PMID: 22056668