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PMID: 23201143 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Embryonic priming of a miRNA locus predetermines postmitotic neuronal left/right asymmetry in C. elegans.

Cell ·Vol. 151 ·No. 6 ·2012-12-07 ·Pages 1229-42

Cochella L, Hobert O

Abstract

The mechanisms by which functional left/right asymmetry arises in morphologically symmetric nervous systems are poorly understood. Here, we provide a mechanistic framework for how functional asymmetry in a postmitotic neuron pair is specified in C. elegans. A key feature of this mechanism is a temporally separated, two-step activation of the lsy-6 miRNA locus. The lsy-6 locus is first "primed" by chromatin decompaction in the precursor for the left neuron, but not the right neuron, several divisions before the neurons are born. lsy-6 expression is then "boosted" to functionally relevant levels several divisions later in the mother of the left neuron, through the activity of a bilaterally expressed transcription factor that can only activate lsy-6 in the primed neuron. This study shows how cells can become committed during early developmental stages to execute a specific fate much later in development and provides a conceptual framework for understanding the generation of neuronal diversity.

MeSH Terms
Animals Base Sequence Body Patterning Caenorhabditis elegans/cytology,embryology,metabolism Cell Lineage Embryo, Nonmammalian/metabolism Gene Expression MicroRNAs/metabolism Neurons/cytology,metabolism Receptors, Notch/metabolism Sequence Alignment
Chemicals
MIRNLsy-6 microRNA, C elegans MicroRNAs Receptors, Notch
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Cochella Luisa
Department of Biochemistry and Molecular Biophysics, Howard Hughes Medical Institute, Columbia University Medical Center, New York, NY 10032, USA. [email protected]
Hobert Oliver
References (29)
29 references, click to expand
  1. Neuron-type specific regulation of a 3'UTR through redundant and combinatorially acting cis-regulatory elements.
    RNA. 2010 Feb;16(2):349-63 PMID: 20040592
  2. Architecture of a microRNA-controlled gene regulatory network that diversifies neuronal cell fates.
    Cold Spring Harb Symp Quant Biol. 2006;71:181-8 PMID: 17381295
  3. The polycomb complex protein mes-2/E(z) promotes the transition from developmental plasticity to differentiation in C. elegans embryos.
    Dev Cell. 2009 May;16(5):699-710 PMID: 19460346
  4. Left-right asymmetry in the nervous system: the Caenorhabditis elegans model.
    Nat Rev Neurosci. 2002 Aug;3(8):629-40 PMID: 12154364
  5. Genetic screens for Caenorhabditis elegans mutants defective in left/right asymmetric neuronal fate specification.
    Genetics. 2007 Aug;176(4):2109-30 PMID: 17717195
  6. A Genome-Wide RNAi Screen for Factors Involved in Neuronal Specification in Caenorhabditis elegans.
    PLoS Genet. 2011 Jun;7(6):e1002109 PMID: 21698137
  7. Large-scale chromatin unfolding and remodeling induced by VP16 acidic activation domain.
    J Cell Biol. 1999 Jun 28;145(7):1341-54 PMID: 10385516
  8. Computer control of microscopes using µManager.
    Curr Protoc Mol Biol. 2010 Oct;Chapter 14:Unit14.20 PMID: 20890901
  9. The T-box transcription factors TBX-37 and TBX-38 link GLP-1/Notch signaling to mesoderm induction in C. elegans embryos.
    Development. 2004 May;131(9):1967-78 PMID: 15056620
  10. The spatial dynamics of tissue-specific promoters during C. elegans development.
    Genes Dev. 2010 Apr 15;24(8):766-82 PMID: 20395364
  11. Differential large-scale chromatin compaction and intranuclear positioning of transcribed versus non-transcribed transgene arrays containing beta-globin regulatory sequences.
    J Cell Sci. 2004 Sep 1;117(Pt 19):4603-14 PMID: 15331668
  12. A toolkit and robust pipeline for the generation of fosmid-based reporter genes in C. elegans.
    PLoS One. 2009;4(3):e4625 PMID: 19259264
  13. A microRNA controlling left/right neuronal asymmetry in Caenorhabditis elegans.
    Nature. 2003 Dec 18;426(6968):845-9 PMID: 14685240
  14. Hepatic specification of the gut endoderm in vitro: cell signaling and transcriptional control.
    Genes Dev. 1996 Jul 1;10(13):1670-82 PMID: 8682297
  15. Notch signaling in the C. elegans embryo.
    WormBook. 2005 Jun 25;:1-16 PMID: 18050407
  16. Lateralized gustatory behavior of C. elegans is controlled by specific receptor-type guanylyl cyclases.
    Curr Biol. 2009 Jun 23;19(12):996-1004 PMID: 19523832
  17. Imaging individual mRNA molecules using multiple singly labeled probes.
    Nat Methods. 2008 Oct;5(10):877-9 PMID: 18806792
  18. Cis-regulatory mechanisms of left/right asymmetric neuron-subtype specification in C. elegans.
    Development. 2009 Jan;136(1):147-60 PMID: 19060335
  19. Early embryonic programming of neuronal left/right asymmetry in C. elegans.
    Curr Biol. 2006 Dec 5;16(23):2279-92 PMID: 17141609
  20. Dynamic chromatin organization during foregut development mediated by the organ selector gene PHA-4/FoxA.
    PLoS Genet. 2010 Aug 12;6(8): PMID: 20714352
  21. MicroRNAs acting in a double-negative feedback loop to control a neuronal cell fate decision.
    Proc Natl Acad Sci U S A. 2005 Aug 30;102(35):12449-54 PMID: 16099833
  22. The complete family of genes encoding G proteins of Caenorhabditis elegans.
    Nat Genet. 1999 Apr;21(4):414-9 PMID: 10192394
  23. The molecular signature and cis-regulatory architecture of a C. elegans gustatory neuron.
    Genes Dev. 2007 Jul 1;21(13):1653-74 PMID: 17606643
  24. Molecular approaches to brain asymmetry and handedness.
    Nat Rev Neurosci. 2006 Aug;7(8):655-62 PMID: 16858393
  25. MicroRNAs act sequentially and asymmetrically to control chemosensory laterality in the nematode.
    Nature. 2004 Aug 12;430(7001):785-9 PMID: 15306811
  26. Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project.
    Science. 2010 Dec 24;330(6012):1775-87 PMID: 21177976
  27. Assessing normal embryogenesis in Caenorhabditis elegans using a 4D microscope: variability of development and regional specification.
    Dev Biol. 1997 Apr 15;184(2):234-65 PMID: 9133433
  28. Cis-regulatory mutations in the Caenorhabditis elegans homeobox gene locus cog-1 affect neuronal development.
    Genetics. 2009 Apr;181(4):1679-86 PMID: 19189954
  29. Pioneer transcription factors: establishing competence for gene expression.
    Genes Dev. 2011 Nov 1;25(21):2227-41 PMID: 22056668
Article Info
Journal
Cell
Abbr.
Cell
ISSN
1097-4172
Published
2012-12-07
Epub
2012-00-29
Pages
1229-42
Language
English
Region
United States
NLM ID
0413066
PMCID
PMC3529140
Subset
IM
Grants
Howard Hughes Medical Institute · United States
NINDS NIH HHS · R01NS039996-05 · United States
NINDS NIH HHS · R01 NS050266 · United States
NINDS NIH HHS · R01 NS039996 · United States
NINDS NIH HHS · R01NS050266-03 · United States
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