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PMID: 2338714 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Human DNA TATA boxes and transcription initiation sites. A statistical study.

Journal of molecular biology ·Vol. 213 ·No. 1 ·1990-05-05 ·Pages 37-52

Penotti FE

Abstract

A statistical study of "TATA", or Hogness, boxes and transcription initiation sites in human DNA protein-coding genes is presented. The range over which the two signal sequences extend is assessed, and their information content is evaluated. The results are compared with those obtained from "general eukaryotic" samples (including sequences from various eukaryotic species and viruses). Statistically significant differences are found for both signals, and are especially noticeable for transcription initiation sites. The possibility that the latter may contain sufficient information to resolve the remaining ambiguity in the position of the transcription start point once a TATA box has been located is explored.

MeSH Terms
Base Sequence DNA/genetics Humans Models, Genetic Molecular Sequence Data Promoter Regions, Genetic Regulatory Sequences, Nucleic Acid Statistics as Topic Transcription, Genetic
Chemicals
DNA
Authors & Affiliations
1 authors, click to expand affiliations / ORCID
Penotti F E
Consiglio Nazionale delle Ricerche, Servizio Informatico Area Milanese, Milano, Italy.
Article Info
Journal
Journal of molecular biology
Abbr.
J Mol Biol
ISSN
0022-2836
Published
1990-05-05
Pages
37-52
Language
English
Region
England
NLM ID
2985088R
Subset
IM
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